Protein–RNA interactions for Protein: Q9QY14

Foxe3, Forkhead box protein E3, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxe3Q9QY14 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.29■□□□□ 0.36
Foxe3Q9QY14 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.29■□□□□ 0.36
Foxe3Q9QY14 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.29■□□□□ 0.36
Foxe3Q9QY14 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Foxe3Q9QY14 AC131709.1-201ENSMUST00000224731 1180 ntBASIC17.29■□□□□ 0.36
Foxe3Q9QY14 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxe3Q9QY14 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.29■□□□□ 0.36
Foxe3Q9QY14 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.29■□□□□ 0.36
Foxe3Q9QY14 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxe3Q9QY14 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Foxe3Q9QY14 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
Foxe3Q9QY14 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Foxe3Q9QY14 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxe3Q9QY14 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxe3Q9QY14 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxe3Q9QY14 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxe3Q9QY14 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxe3Q9QY14 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Foxe3Q9QY14 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxe3Q9QY14 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.28■□□□□ 0.36
Foxe3Q9QY14 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Foxe3Q9QY14 Gm5253-201ENSMUST00000187104 1025 ntBASIC17.28■□□□□ 0.36
Foxe3Q9QY14 Gm45167-201ENSMUST00000208007 322 ntBASIC17.28■□□□□ 0.36
Foxe3Q9QY14 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxe3Q9QY14 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxe3Q9QY14 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Foxe3Q9QY14 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Foxe3Q9QY14 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxe3Q9QY14 Gm8784-201ENSMUST00000222096 1435 ntBASIC17.28■□□□□ 0.36
Foxe3Q9QY14 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxe3Q9QY14 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxe3Q9QY14 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxe3Q9QY14 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxe3Q9QY14 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxe3Q9QY14 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Foxe3Q9QY14 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Foxe3Q9QY14 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Foxe3Q9QY14 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Foxe3Q9QY14 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Foxe3Q9QY14 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Foxe3Q9QY14 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Foxe3Q9QY14 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Foxe3Q9QY14 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Foxe3Q9QY14 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Foxe3Q9QY14 Gm27300-201ENSMUST00000184085 97 ntBASIC17.27■□□□□ 0.36
Foxe3Q9QY14 Gm27335-201ENSMUST00000184758 97 ntBASIC17.27■□□□□ 0.36
Foxe3Q9QY14 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Foxe3Q9QY14 AC117588.1-201ENSMUST00000228510 999 ntBASIC17.27■□□□□ 0.36
Foxe3Q9QY14 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Foxe3Q9QY14 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Foxe3Q9QY14 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Foxe3Q9QY14 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Foxe3Q9QY14 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Foxe3Q9QY14 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.35
Foxe3Q9QY14 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Foxe3Q9QY14 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Foxe3Q9QY14 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Foxe3Q9QY14 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxe3Q9QY14 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxe3Q9QY14 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC17.26■□□□□ 0.35
Foxe3Q9QY14 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxe3Q9QY14 Gm15920-201ENSMUST00000118998 402 ntBASIC17.26■□□□□ 0.35
Foxe3Q9QY14 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxe3Q9QY14 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxe3Q9QY14 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxe3Q9QY14 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxe3Q9QY14 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxe3Q9QY14 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Foxe3Q9QY14 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxe3Q9QY14 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxe3Q9QY14 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.26■□□□□ 0.35
Foxe3Q9QY14 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Foxe3Q9QY14 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Foxe3Q9QY14 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Foxe3Q9QY14 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Foxe3Q9QY14 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Foxe3Q9QY14 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Foxe3Q9QY14 Gm4899-201ENSMUST00000178708 719 ntBASIC17.25■□□□□ 0.35
Foxe3Q9QY14 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC17.25■□□□□ 0.35
Foxe3Q9QY14 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.25■□□□□ 0.35
Foxe3Q9QY14 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Foxe3Q9QY14 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Foxe3Q9QY14 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Foxe3Q9QY14 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Foxe3Q9QY14 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Foxe3Q9QY14 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Foxe3Q9QY14 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Foxe3Q9QY14 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Foxe3Q9QY14 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Foxe3Q9QY14 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Foxe3Q9QY14 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Foxe3Q9QY14 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Foxe3Q9QY14 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Foxe3Q9QY14 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Foxe3Q9QY14 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Foxe3Q9QY14 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxe3Q9QY14 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.24■□□□□ 0.35
Foxe3Q9QY14 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxe3Q9QY14 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxe3Q9QY14 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms