Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Msh5Q9QUM7 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Msh5Q9QUM7 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Msh5Q9QUM7 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Msh5Q9QUM7 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Msh5Q9QUM7 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Msh5Q9QUM7 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Msh5Q9QUM7 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Msh5Q9QUM7 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Msh5Q9QUM7 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Msh5Q9QUM7 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Msh5Q9QUM7 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Msh5Q9QUM7 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Msh5Q9QUM7 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
Msh5Q9QUM7 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Msh5Q9QUM7 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
Msh5Q9QUM7 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Msh5Q9QUM7 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Msh5Q9QUM7 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Msh5Q9QUM7 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Msh5Q9QUM7 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Msh5Q9QUM7 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Msh5Q9QUM7 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Msh5Q9QUM7 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.71■□□□□ 0.27
Msh5Q9QUM7 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.71■□□□□ 0.27
Msh5Q9QUM7 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Msh5Q9QUM7 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Msh5Q9QUM7 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Msh5Q9QUM7 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Msh5Q9QUM7 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.71■□□□□ 0.27
Msh5Q9QUM7 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Msh5Q9QUM7 Gm18377-201ENSMUST00000215141 607 ntBASIC16.71■□□□□ 0.27
Msh5Q9QUM7 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Msh5Q9QUM7 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Msh5Q9QUM7 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Msh5Q9QUM7 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Msh5Q9QUM7 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Msh5Q9QUM7 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Msh5Q9QUM7 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Msh5Q9QUM7 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Msh5Q9QUM7 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Msh5Q9QUM7 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Msh5Q9QUM7 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Msh5Q9QUM7 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.26
Msh5Q9QUM7 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Msh5Q9QUM7 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.7■□□□□ 0.26
Msh5Q9QUM7 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Msh5Q9QUM7 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Msh5Q9QUM7 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Msh5Q9QUM7 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.7■□□□□ 0.26
Msh5Q9QUM7 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Msh5Q9QUM7 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Msh5Q9QUM7 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Msh5Q9QUM7 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Msh5Q9QUM7 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.7■□□□□ 0.26
Msh5Q9QUM7 Gm43799-201ENSMUST00000201845 579 ntBASIC16.7■□□□□ 0.26
Msh5Q9QUM7 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.7■□□□□ 0.26
Msh5Q9QUM7 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Msh5Q9QUM7 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Msh5Q9QUM7 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Msh5Q9QUM7 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Msh5Q9QUM7 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Msh5Q9QUM7 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Msh5Q9QUM7 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Msh5Q9QUM7 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Msh5Q9QUM7 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Msh5Q9QUM7 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Msh5Q9QUM7 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Msh5Q9QUM7 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Msh5Q9QUM7 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Msh5Q9QUM7 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.69■□□□□ 0.26
Msh5Q9QUM7 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Msh5Q9QUM7 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Msh5Q9QUM7 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Msh5Q9QUM7 Gm13559-201ENSMUST00000120476 863 ntBASIC16.69■□□□□ 0.26
Msh5Q9QUM7 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Msh5Q9QUM7 Gm37436-201ENSMUST00000193842 1085 ntBASIC16.69■□□□□ 0.26
Msh5Q9QUM7 Gm45484-201ENSMUST00000210310 1141 ntBASIC16.69■□□□□ 0.26
Msh5Q9QUM7 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Msh5Q9QUM7 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Msh5Q9QUM7 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Msh5Q9QUM7 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Msh5Q9QUM7 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Msh5Q9QUM7 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Msh5Q9QUM7 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Msh5Q9QUM7 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Msh5Q9QUM7 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Msh5Q9QUM7 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.69■□□□□ 0.26
Msh5Q9QUM7 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Msh5Q9QUM7 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.69■□□□□ 0.26
Msh5Q9QUM7 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Msh5Q9QUM7 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
Msh5Q9QUM7 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Msh5Q9QUM7 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.68■□□□□ 0.26
Msh5Q9QUM7 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Msh5Q9QUM7 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Msh5Q9QUM7 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Msh5Q9QUM7 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Msh5Q9QUM7 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Msh5Q9QUM7 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms