Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sec61a2Q9JLR1 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.73□□□□□ -0.05
Sec61a2Q9JLR1 Dancr-204ENSMUST00000132389 2347 ntBASIC14.73□□□□□ -0.05
Sec61a2Q9JLR1 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Sec61a2Q9JLR1 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sec61a2Q9JLR1 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sec61a2Q9JLR1 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sec61a2Q9JLR1 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sec61a2Q9JLR1 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sec61a2Q9JLR1 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sec61a2Q9JLR1 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sec61a2Q9JLR1 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
Sec61a2Q9JLR1 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
Sec61a2Q9JLR1 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sec61a2Q9JLR1 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Sec61a2Q9JLR1 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Sec61a2Q9JLR1 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sec61a2Q9JLR1 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Sec61a2Q9JLR1 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sec61a2Q9JLR1 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sec61a2Q9JLR1 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sec61a2Q9JLR1 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sec61a2Q9JLR1 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
Sec61a2Q9JLR1 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.72□□□□□ -0.05
Sec61a2Q9JLR1 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sec61a2Q9JLR1 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Sec61a2Q9JLR1 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.72□□□□□ -0.05
Sec61a2Q9JLR1 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sec61a2Q9JLR1 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sec61a2Q9JLR1 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sec61a2Q9JLR1 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Sec61a2Q9JLR1 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sec61a2Q9JLR1 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sec61a2Q9JLR1 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.72□□□□□ -0.05
Sec61a2Q9JLR1 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sec61a2Q9JLR1 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Sec61a2Q9JLR1 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Sec61a2Q9JLR1 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Sec61a2Q9JLR1 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sec61a2Q9JLR1 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.71□□□□□ -0.05
Sec61a2Q9JLR1 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sec61a2Q9JLR1 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sec61a2Q9JLR1 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sec61a2Q9JLR1 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sec61a2Q9JLR1 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
Sec61a2Q9JLR1 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC14.71□□□□□ -0.05
Sec61a2Q9JLR1 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Sec61a2Q9JLR1 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sec61a2Q9JLR1 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.71□□□□□ -0.05
Sec61a2Q9JLR1 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.71□□□□□ -0.05
Sec61a2Q9JLR1 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.71□□□□□ -0.05
Sec61a2Q9JLR1 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sec61a2Q9JLR1 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.71□□□□□ -0.05
Sec61a2Q9JLR1 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Sec61a2Q9JLR1 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Sec61a2Q9JLR1 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC14.71□□□□□ -0.05
Sec61a2Q9JLR1 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.71□□□□□ -0.05
Sec61a2Q9JLR1 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Sec61a2Q9JLR1 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.71□□□□□ -0.05
Sec61a2Q9JLR1 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Sec61a2Q9JLR1 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sec61a2Q9JLR1 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sec61a2Q9JLR1 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Sec61a2Q9JLR1 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Sec61a2Q9JLR1 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sec61a2Q9JLR1 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Sec61a2Q9JLR1 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sec61a2Q9JLR1 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sec61a2Q9JLR1 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sec61a2Q9JLR1 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Sec61a2Q9JLR1 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sec61a2Q9JLR1 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
Sec61a2Q9JLR1 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sec61a2Q9JLR1 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Sec61a2Q9JLR1 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Sec61a2Q9JLR1 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sec61a2Q9JLR1 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sec61a2Q9JLR1 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.7□□□□□ -0.06
Sec61a2Q9JLR1 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sec61a2Q9JLR1 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sec61a2Q9JLR1 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Sec61a2Q9JLR1 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sec61a2Q9JLR1 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sec61a2Q9JLR1 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sec61a2Q9JLR1 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sec61a2Q9JLR1 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sec61a2Q9JLR1 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sec61a2Q9JLR1 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sec61a2Q9JLR1 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
Sec61a2Q9JLR1 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC14.7□□□□□ -0.06
Sec61a2Q9JLR1 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sec61a2Q9JLR1 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sec61a2Q9JLR1 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sec61a2Q9JLR1 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sec61a2Q9JLR1 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sec61a2Q9JLR1 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sec61a2Q9JLR1 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sec61a2Q9JLR1 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.7□□□□□ -0.06
Sec61a2Q9JLR1 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sec61a2Q9JLR1 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms