Protein–RNA interactions for Protein: Q9JJ80

Rpf2, Ribosome production factor 2 homolog, mousemouse

Known RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpf2Q9JJ80 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpf2Q9JJ80 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpf2Q9JJ80 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpf2Q9JJ80 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Rpf2Q9JJ80 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rpf2Q9JJ80 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.38■□□□□ 0.37
Rpf2Q9JJ80 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Rpf2Q9JJ80 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Rpf2Q9JJ80 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Rpf2Q9JJ80 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpf2Q9JJ80 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Rpf2Q9JJ80 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.38■□□□□ 0.37
Rpf2Q9JJ80 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpf2Q9JJ80 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpf2Q9JJ80 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpf2Q9JJ80 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpf2Q9JJ80 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Rpf2Q9JJ80 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC17.38■□□□□ 0.37
Rpf2Q9JJ80 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rpf2Q9JJ80 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpf2Q9JJ80 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpf2Q9JJ80 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.37■□□□□ 0.37
Rpf2Q9JJ80 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpf2Q9JJ80 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpf2Q9JJ80 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpf2Q9JJ80 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.37■□□□□ 0.37
Rpf2Q9JJ80 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rpf2Q9JJ80 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Rpf2Q9JJ80 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rpf2Q9JJ80 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpf2Q9JJ80 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpf2Q9JJ80 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Rpf2Q9JJ80 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpf2Q9JJ80 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Rpf2Q9JJ80 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rpf2Q9JJ80 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rpf2Q9JJ80 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rpf2Q9JJ80 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rpf2Q9JJ80 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Rpf2Q9JJ80 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Rpf2Q9JJ80 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC17.37■□□□□ 0.37
Rpf2Q9JJ80 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpf2Q9JJ80 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpf2Q9JJ80 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpf2Q9JJ80 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rpf2Q9JJ80 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpf2Q9JJ80 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.36■□□□□ 0.37
Rpf2Q9JJ80 Gm36967-201ENSMUST00000193814 266 ntBASIC17.36■□□□□ 0.37
Rpf2Q9JJ80 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.36■□□□□ 0.37
Rpf2Q9JJ80 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpf2Q9JJ80 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpf2Q9JJ80 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.36■□□□□ 0.37
Rpf2Q9JJ80 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpf2Q9JJ80 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpf2Q9JJ80 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpf2Q9JJ80 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rpf2Q9JJ80 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rpf2Q9JJ80 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Rpf2Q9JJ80 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpf2Q9JJ80 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpf2Q9JJ80 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpf2Q9JJ80 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Rpf2Q9JJ80 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpf2Q9JJ80 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rpf2Q9JJ80 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpf2Q9JJ80 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.35■□□□□ 0.37
Rpf2Q9JJ80 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Rpf2Q9JJ80 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.35■□□□□ 0.37
Rpf2Q9JJ80 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpf2Q9JJ80 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rpf2Q9JJ80 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
Rpf2Q9JJ80 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpf2Q9JJ80 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpf2Q9JJ80 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpf2Q9JJ80 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpf2Q9JJ80 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpf2Q9JJ80 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpf2Q9JJ80 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpf2Q9JJ80 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rpf2Q9JJ80 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
Rpf2Q9JJ80 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rpf2Q9JJ80 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpf2Q9JJ80 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpf2Q9JJ80 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC17.34■□□□□ 0.37
Rpf2Q9JJ80 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Rpf2Q9JJ80 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpf2Q9JJ80 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpf2Q9JJ80 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Rpf2Q9JJ80 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rpf2Q9JJ80 Gm11539-201ENSMUST00000119837 557 ntBASIC17.34■□□□□ 0.37
Rpf2Q9JJ80 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC17.34■□□□□ 0.37
Rpf2Q9JJ80 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.34■□□□□ 0.37
Rpf2Q9JJ80 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpf2Q9JJ80 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC17.34■□□□□ 0.37
Rpf2Q9JJ80 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.34■□□□□ 0.37
Rpf2Q9JJ80 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.34■□□□□ 0.37
Rpf2Q9JJ80 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpf2Q9JJ80 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rpf2Q9JJ80 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.34■□□□□ 0.37
Rpf2Q9JJ80 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms