Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smco4Q9JIS3 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smco4Q9JIS3 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.19□□□□□ -0.3
Smco4Q9JIS3 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smco4Q9JIS3 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC13.19□□□□□ -0.3
Smco4Q9JIS3 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Smco4Q9JIS3 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smco4Q9JIS3 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Smco4Q9JIS3 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smco4Q9JIS3 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smco4Q9JIS3 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC13.19□□□□□ -0.3
Smco4Q9JIS3 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smco4Q9JIS3 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smco4Q9JIS3 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smco4Q9JIS3 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smco4Q9JIS3 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smco4Q9JIS3 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smco4Q9JIS3 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smco4Q9JIS3 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Smco4Q9JIS3 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Smco4Q9JIS3 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smco4Q9JIS3 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smco4Q9JIS3 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smco4Q9JIS3 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smco4Q9JIS3 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Smco4Q9JIS3 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smco4Q9JIS3 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smco4Q9JIS3 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smco4Q9JIS3 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smco4Q9JIS3 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smco4Q9JIS3 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smco4Q9JIS3 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smco4Q9JIS3 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
Smco4Q9JIS3 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smco4Q9JIS3 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smco4Q9JIS3 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.18□□□□□ -0.3
Smco4Q9JIS3 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smco4Q9JIS3 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smco4Q9JIS3 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC13.18□□□□□ -0.3
Smco4Q9JIS3 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smco4Q9JIS3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC13.18□□□□□ -0.3
Smco4Q9JIS3 Gm9207-201ENSMUST00000198773 1115 ntBASIC13.18□□□□□ -0.3
Smco4Q9JIS3 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smco4Q9JIS3 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smco4Q9JIS3 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smco4Q9JIS3 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smco4Q9JIS3 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Smco4Q9JIS3 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Smco4Q9JIS3 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Smco4Q9JIS3 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smco4Q9JIS3 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smco4Q9JIS3 AC165080.2-201ENSMUST00000217491 1530 ntBASIC13.18□□□□□ -0.3
Smco4Q9JIS3 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Smco4Q9JIS3 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Smco4Q9JIS3 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smco4Q9JIS3 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smco4Q9JIS3 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smco4Q9JIS3 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Smco4Q9JIS3 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smco4Q9JIS3 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Smco4Q9JIS3 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smco4Q9JIS3 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smco4Q9JIS3 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smco4Q9JIS3 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smco4Q9JIS3 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Smco4Q9JIS3 Gm22325-201ENSMUST00000158904 308 ntBASIC13.17□□□□□ -0.3
Smco4Q9JIS3 Gm26971-201ENSMUST00000182423 1072 ntBASIC13.17□□□□□ -0.3
Smco4Q9JIS3 Gm29791-202ENSMUST00000207888 369 ntBASIC13.17□□□□□ -0.3
Smco4Q9JIS3 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC13.17□□□□□ -0.3
Smco4Q9JIS3 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smco4Q9JIS3 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smco4Q9JIS3 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.17□□□□□ -0.3
Smco4Q9JIS3 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.17□□□□□ -0.3
Smco4Q9JIS3 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smco4Q9JIS3 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.17□□□□□ -0.3
Smco4Q9JIS3 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smco4Q9JIS3 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Smco4Q9JIS3 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smco4Q9JIS3 Gm44291-201ENSMUST00000203102 2865 ntBASIC13.17□□□□□ -0.3
Smco4Q9JIS3 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smco4Q9JIS3 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smco4Q9JIS3 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Smco4Q9JIS3 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smco4Q9JIS3 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Smco4Q9JIS3 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.17□□□□□ -0.3
Smco4Q9JIS3 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC13.17□□□□□ -0.3
Smco4Q9JIS3 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.16□□□□□ -0.3
Smco4Q9JIS3 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smco4Q9JIS3 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Smco4Q9JIS3 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smco4Q9JIS3 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smco4Q9JIS3 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smco4Q9JIS3 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Smco4Q9JIS3 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smco4Q9JIS3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smco4Q9JIS3 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC13.16□□□□□ -0.3
Smco4Q9JIS3 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC13.16□□□□□ -0.3
Smco4Q9JIS3 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC13.16□□□□□ -0.3
Smco4Q9JIS3 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smco4Q9JIS3 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms