Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx2-4Q9EQM3 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx2-4Q9EQM3 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx2-4Q9EQM3 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx2-4Q9EQM3 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx2-4Q9EQM3 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx2-4Q9EQM3 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx2-4Q9EQM3 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx2-4Q9EQM3 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx2-4Q9EQM3 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx2-4Q9EQM3 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx2-4Q9EQM3 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC16.71■□□□□ 0.27
Nkx2-4Q9EQM3 Gm45167-201ENSMUST00000208007 322 ntBASIC16.71■□□□□ 0.27
Nkx2-4Q9EQM3 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx2-4Q9EQM3 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx2-4Q9EQM3 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx2-4Q9EQM3 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx2-4Q9EQM3 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Nkx2-4Q9EQM3 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx2-4Q9EQM3 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Nkx2-4Q9EQM3 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx2-4Q9EQM3 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx2-4Q9EQM3 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.71■□□□□ 0.27
Nkx2-4Q9EQM3 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx2-4Q9EQM3 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx2-4Q9EQM3 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Nkx2-4Q9EQM3 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Nkx2-4Q9EQM3 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.26
Nkx2-4Q9EQM3 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx2-4Q9EQM3 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx2-4Q9EQM3 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx2-4Q9EQM3 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx2-4Q9EQM3 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx2-4Q9EQM3 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Nkx2-4Q9EQM3 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx2-4Q9EQM3 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Nkx2-4Q9EQM3 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx2-4Q9EQM3 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx2-4Q9EQM3 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.7■□□□□ 0.26
Nkx2-4Q9EQM3 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx2-4Q9EQM3 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx2-4Q9EQM3 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Nkx2-4Q9EQM3 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Nkx2-4Q9EQM3 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.7■□□□□ 0.26
Nkx2-4Q9EQM3 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Nkx2-4Q9EQM3 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-4Q9EQM3 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-4Q9EQM3 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-4Q9EQM3 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.69■□□□□ 0.26
Nkx2-4Q9EQM3 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Nkx2-4Q9EQM3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-4Q9EQM3 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-4Q9EQM3 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-4Q9EQM3 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Nkx2-4Q9EQM3 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-4Q9EQM3 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-4Q9EQM3 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC16.69■□□□□ 0.26
Nkx2-4Q9EQM3 Gm27300-201ENSMUST00000184085 97 ntBASIC16.69■□□□□ 0.26
Nkx2-4Q9EQM3 Gm27335-201ENSMUST00000184758 97 ntBASIC16.69■□□□□ 0.26
Nkx2-4Q9EQM3 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.69■□□□□ 0.26
Nkx2-4Q9EQM3 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-4Q9EQM3 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-4Q9EQM3 Gm18622-201ENSMUST00000219361 595 ntBASIC16.69■□□□□ 0.26
Nkx2-4Q9EQM3 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-4Q9EQM3 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Nkx2-4Q9EQM3 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-4Q9EQM3 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.69■□□□□ 0.26
Nkx2-4Q9EQM3 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-4Q9EQM3 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-4Q9EQM3 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-4Q9EQM3 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-4Q9EQM3 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-4Q9EQM3 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-4Q9EQM3 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Nkx2-4Q9EQM3 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-4Q9EQM3 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-4Q9EQM3 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-4Q9EQM3 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Nkx2-4Q9EQM3 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.68■□□□□ 0.26
Nkx2-4Q9EQM3 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC16.68■□□□□ 0.26
Nkx2-4Q9EQM3 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Nkx2-4Q9EQM3 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.68■□□□□ 0.26
Nkx2-4Q9EQM3 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.68■□□□□ 0.26
Nkx2-4Q9EQM3 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-4Q9EQM3 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-4Q9EQM3 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
Nkx2-4Q9EQM3 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-4Q9EQM3 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Nkx2-4Q9EQM3 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-4Q9EQM3 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-4Q9EQM3 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Nkx2-4Q9EQM3 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-4Q9EQM3 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-4Q9EQM3 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-4Q9EQM3 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-4Q9EQM3 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-4Q9EQM3 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Nkx2-4Q9EQM3 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.67■□□□□ 0.26
Nkx2-4Q9EQM3 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Nkx2-4Q9EQM3 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms