Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps35Q9EQH3 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps35Q9EQH3 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps35Q9EQH3 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.36■□□□□ 0.21
Vps35Q9EQH3 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps35Q9EQH3 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps35Q9EQH3 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps35Q9EQH3 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps35Q9EQH3 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps35Q9EQH3 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps35Q9EQH3 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Vps35Q9EQH3 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Vps35Q9EQH3 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps35Q9EQH3 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps35Q9EQH3 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Vps35Q9EQH3 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps35Q9EQH3 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Vps35Q9EQH3 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.36■□□□□ 0.21
Vps35Q9EQH3 Gm18421-201ENSMUST00000204122 625 ntBASIC16.36■□□□□ 0.21
Vps35Q9EQH3 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Vps35Q9EQH3 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Vps35Q9EQH3 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps35Q9EQH3 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps35Q9EQH3 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps35Q9EQH3 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps35Q9EQH3 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps35Q9EQH3 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps35Q9EQH3 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps35Q9EQH3 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps35Q9EQH3 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps35Q9EQH3 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps35Q9EQH3 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps35Q9EQH3 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps35Q9EQH3 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps35Q9EQH3 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.35■□□□□ 0.21
Vps35Q9EQH3 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps35Q9EQH3 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps35Q9EQH3 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps35Q9EQH3 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps35Q9EQH3 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps35Q9EQH3 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps35Q9EQH3 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Vps35Q9EQH3 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Vps35Q9EQH3 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC16.35■□□□□ 0.21
Vps35Q9EQH3 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps35Q9EQH3 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Vps35Q9EQH3 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Vps35Q9EQH3 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps35Q9EQH3 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps35Q9EQH3 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps35Q9EQH3 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps35Q9EQH3 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Vps35Q9EQH3 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps35Q9EQH3 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps35Q9EQH3 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC16.35■□□□□ 0.21
Vps35Q9EQH3 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps35Q9EQH3 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps35Q9EQH3 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vps35Q9EQH3 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps35Q9EQH3 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps35Q9EQH3 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps35Q9EQH3 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
Vps35Q9EQH3 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps35Q9EQH3 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps35Q9EQH3 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vps35Q9EQH3 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps35Q9EQH3 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps35Q9EQH3 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps35Q9EQH3 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vps35Q9EQH3 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.34■□□□□ 0.21
Vps35Q9EQH3 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps35Q9EQH3 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps35Q9EQH3 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps35Q9EQH3 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vps35Q9EQH3 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps35Q9EQH3 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps35Q9EQH3 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps35Q9EQH3 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps35Q9EQH3 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps35Q9EQH3 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vps35Q9EQH3 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vps35Q9EQH3 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.34■□□□□ 0.21
Vps35Q9EQH3 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC16.33■□□□□ 0.21
Vps35Q9EQH3 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.21
Vps35Q9EQH3 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.33■□□□□ 0.21
Vps35Q9EQH3 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Vps35Q9EQH3 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Vps35Q9EQH3 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Vps35Q9EQH3 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps35Q9EQH3 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps35Q9EQH3 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps35Q9EQH3 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps35Q9EQH3 Mir770-201ENSMUST00000103252 94 ntBASIC16.33■□□□□ 0.2
Vps35Q9EQH3 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Vps35Q9EQH3 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Vps35Q9EQH3 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC16.33■□□□□ 0.2
Vps35Q9EQH3 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps35Q9EQH3 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vps35Q9EQH3 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Vps35Q9EQH3 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms