Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gtf3c6Q9D8P7 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gtf3c6Q9D8P7 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Gtf3c6Q9D8P7 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Gtf3c6Q9D8P7 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gtf3c6Q9D8P7 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.45■□□□□ 0.38
Gtf3c6Q9D8P7 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Gtf3c6Q9D8P7 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Gtf3c6Q9D8P7 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gtf3c6Q9D8P7 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.44■□□□□ 0.38
Gtf3c6Q9D8P7 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gtf3c6Q9D8P7 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gtf3c6Q9D8P7 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gtf3c6Q9D8P7 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
Gtf3c6Q9D8P7 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gtf3c6Q9D8P7 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Gtf3c6Q9D8P7 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gtf3c6Q9D8P7 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.44■□□□□ 0.38
Gtf3c6Q9D8P7 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.44■□□□□ 0.38
Gtf3c6Q9D8P7 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Gtf3c6Q9D8P7 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Gtf3c6Q9D8P7 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Gtf3c6Q9D8P7 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gtf3c6Q9D8P7 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Gtf3c6Q9D8P7 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gtf3c6Q9D8P7 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gtf3c6Q9D8P7 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gtf3c6Q9D8P7 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Gtf3c6Q9D8P7 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gtf3c6Q9D8P7 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gtf3c6Q9D8P7 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Gtf3c6Q9D8P7 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Gtf3c6Q9D8P7 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Gtf3c6Q9D8P7 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Gtf3c6Q9D8P7 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.43■□□□□ 0.38
Gtf3c6Q9D8P7 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Gtf3c6Q9D8P7 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
Gtf3c6Q9D8P7 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gtf3c6Q9D8P7 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gtf3c6Q9D8P7 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Gtf3c6Q9D8P7 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gtf3c6Q9D8P7 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gtf3c6Q9D8P7 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gtf3c6Q9D8P7 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Gtf3c6Q9D8P7 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gtf3c6Q9D8P7 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gtf3c6Q9D8P7 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gtf3c6Q9D8P7 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gtf3c6Q9D8P7 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gtf3c6Q9D8P7 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.43■□□□□ 0.38
Gtf3c6Q9D8P7 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.43■□□□□ 0.38
Gtf3c6Q9D8P7 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.43■□□□□ 0.38
Gtf3c6Q9D8P7 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.43■□□□□ 0.38
Gtf3c6Q9D8P7 Gm37722-201ENSMUST00000193757 208 ntBASIC17.43■□□□□ 0.38
Gtf3c6Q9D8P7 Gm32996-201ENSMUST00000199828 1447 ntBASIC17.43■□□□□ 0.38
Gtf3c6Q9D8P7 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Gtf3c6Q9D8P7 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gtf3c6Q9D8P7 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gtf3c6Q9D8P7 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gtf3c6Q9D8P7 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gtf3c6Q9D8P7 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gtf3c6Q9D8P7 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Gtf3c6Q9D8P7 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Gtf3c6Q9D8P7 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC17.43■□□□□ 0.38
Gtf3c6Q9D8P7 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Gtf3c6Q9D8P7 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gtf3c6Q9D8P7 Gm37660-201ENSMUST00000192754 1732 ntBASIC17.42■□□□□ 0.38
Gtf3c6Q9D8P7 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Gtf3c6Q9D8P7 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gtf3c6Q9D8P7 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.42■□□□□ 0.38
Gtf3c6Q9D8P7 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Gtf3c6Q9D8P7 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Gtf3c6Q9D8P7 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Gtf3c6Q9D8P7 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.42■□□□□ 0.38
Gtf3c6Q9D8P7 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Gtf3c6Q9D8P7 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.42■□□□□ 0.38
Gtf3c6Q9D8P7 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.42■□□□□ 0.38
Gtf3c6Q9D8P7 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.42■□□□□ 0.38
Gtf3c6Q9D8P7 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Gtf3c6Q9D8P7 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gtf3c6Q9D8P7 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Gtf3c6Q9D8P7 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Gtf3c6Q9D8P7 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Gtf3c6Q9D8P7 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.42■□□□□ 0.38
Gtf3c6Q9D8P7 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Gtf3c6Q9D8P7 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.41■□□□□ 0.38
Gtf3c6Q9D8P7 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gtf3c6Q9D8P7 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC17.41■□□□□ 0.38
Gtf3c6Q9D8P7 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Gtf3c6Q9D8P7 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Gtf3c6Q9D8P7 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gtf3c6Q9D8P7 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.41■□□□□ 0.38
Gtf3c6Q9D8P7 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Gtf3c6Q9D8P7 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.41■□□□□ 0.38
Gtf3c6Q9D8P7 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gtf3c6Q9D8P7 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gtf3c6Q9D8P7 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Gtf3c6Q9D8P7 Gm11355-201ENSMUST00000121120 306 ntBASIC17.41■□□□□ 0.38
Gtf3c6Q9D8P7 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Gtf3c6Q9D8P7 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms