Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Upk3bl1Q9D701 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Upk3bl1Q9D701 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Upk3bl1Q9D701 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Upk3bl1Q9D701 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC14.91□□□□□ -0.02
Upk3bl1Q9D701 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Upk3bl1Q9D701 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Upk3bl1Q9D701 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Upk3bl1Q9D701 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Upk3bl1Q9D701 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Upk3bl1Q9D701 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Upk3bl1Q9D701 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Upk3bl1Q9D701 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Upk3bl1Q9D701 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Upk3bl1Q9D701 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Upk3bl1Q9D701 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Upk3bl1Q9D701 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Upk3bl1Q9D701 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Upk3bl1Q9D701 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Upk3bl1Q9D701 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Upk3bl1Q9D701 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Upk3bl1Q9D701 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Upk3bl1Q9D701 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Upk3bl1Q9D701 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Upk3bl1Q9D701 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Upk3bl1Q9D701 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC14.9□□□□□ -0.02
Upk3bl1Q9D701 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC14.9□□□□□ -0.02
Upk3bl1Q9D701 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Upk3bl1Q9D701 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC14.9□□□□□ -0.02
Upk3bl1Q9D701 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC14.9□□□□□ -0.02
Upk3bl1Q9D701 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Upk3bl1Q9D701 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Upk3bl1Q9D701 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Upk3bl1Q9D701 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Upk3bl1Q9D701 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Upk3bl1Q9D701 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Upk3bl1Q9D701 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
Upk3bl1Q9D701 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC14.9□□□□□ -0.02
Upk3bl1Q9D701 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Upk3bl1Q9D701 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.9□□□□□ -0.02
Upk3bl1Q9D701 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Upk3bl1Q9D701 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
Upk3bl1Q9D701 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Upk3bl1Q9D701 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Upk3bl1Q9D701 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Upk3bl1Q9D701 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Upk3bl1Q9D701 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Upk3bl1Q9D701 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Upk3bl1Q9D701 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Upk3bl1Q9D701 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Upk3bl1Q9D701 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Upk3bl1Q9D701 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Upk3bl1Q9D701 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Upk3bl1Q9D701 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Upk3bl1Q9D701 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Upk3bl1Q9D701 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC14.89□□□□□ -0.03
Upk3bl1Q9D701 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC14.89□□□□□ -0.03
Upk3bl1Q9D701 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC14.89□□□□□ -0.03
Upk3bl1Q9D701 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Upk3bl1Q9D701 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Upk3bl1Q9D701 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Upk3bl1Q9D701 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Upk3bl1Q9D701 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Upk3bl1Q9D701 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Upk3bl1Q9D701 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Upk3bl1Q9D701 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Upk3bl1Q9D701 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Upk3bl1Q9D701 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.89□□□□□ -0.03
Upk3bl1Q9D701 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Upk3bl1Q9D701 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
Upk3bl1Q9D701 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Upk3bl1Q9D701 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Upk3bl1Q9D701 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Upk3bl1Q9D701 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Upk3bl1Q9D701 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Upk3bl1Q9D701 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Upk3bl1Q9D701 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC14.88□□□□□ -0.03
Upk3bl1Q9D701 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC14.88□□□□□ -0.03
Upk3bl1Q9D701 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Upk3bl1Q9D701 Gm6365-201ENSMUST00000054711 744 ntBASIC14.88□□□□□ -0.03
Upk3bl1Q9D701 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC14.88□□□□□ -0.03
Upk3bl1Q9D701 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Upk3bl1Q9D701 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Upk3bl1Q9D701 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.88□□□□□ -0.03
Upk3bl1Q9D701 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Upk3bl1Q9D701 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.88□□□□□ -0.03
Upk3bl1Q9D701 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Upk3bl1Q9D701 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Upk3bl1Q9D701 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Upk3bl1Q9D701 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk3bl1Q9D701 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Upk3bl1Q9D701 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk3bl1Q9D701 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk3bl1Q9D701 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk3bl1Q9D701 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk3bl1Q9D701 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.87□□□□□ -0.03
Upk3bl1Q9D701 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Upk3bl1Q9D701 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Upk3bl1Q9D701 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC14.87□□□□□ -0.03
Upk3bl1Q9D701 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms