Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trim42Q9D2H5 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
Trim42Q9D2H5 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trim42Q9D2H5 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim42Q9D2H5 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim42Q9D2H5 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
Trim42Q9D2H5 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trim42Q9D2H5 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.36■□□□□ 0.21
Trim42Q9D2H5 Mir5133-201ENSMUST00000174955 77 ntBASIC16.36■□□□□ 0.21
Trim42Q9D2H5 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.36■□□□□ 0.21
Trim42Q9D2H5 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trim42Q9D2H5 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim42Q9D2H5 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim42Q9D2H5 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim42Q9D2H5 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trim42Q9D2H5 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim42Q9D2H5 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim42Q9D2H5 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trim42Q9D2H5 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trim42Q9D2H5 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC16.35■□□□□ 0.21
Trim42Q9D2H5 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim42Q9D2H5 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim42Q9D2H5 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim42Q9D2H5 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Trim42Q9D2H5 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim42Q9D2H5 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim42Q9D2H5 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trim42Q9D2H5 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.35■□□□□ 0.21
Trim42Q9D2H5 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim42Q9D2H5 Gm17661-201ENSMUST00000170317 270 ntBASIC16.35■□□□□ 0.21
Trim42Q9D2H5 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim42Q9D2H5 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Trim42Q9D2H5 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim42Q9D2H5 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim42Q9D2H5 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.35■□□□□ 0.21
Trim42Q9D2H5 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim42Q9D2H5 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Trim42Q9D2H5 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Trim42Q9D2H5 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim42Q9D2H5 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim42Q9D2H5 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.35■□□□□ 0.21
Trim42Q9D2H5 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim42Q9D2H5 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trim42Q9D2H5 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trim42Q9D2H5 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trim42Q9D2H5 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim42Q9D2H5 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim42Q9D2H5 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim42Q9D2H5 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim42Q9D2H5 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Trim42Q9D2H5 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim42Q9D2H5 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim42Q9D2H5 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.34■□□□□ 0.21
Trim42Q9D2H5 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.34■□□□□ 0.21
Trim42Q9D2H5 Gm24841-201ENSMUST00000158676 357 ntBASIC16.34■□□□□ 0.21
Trim42Q9D2H5 Gm37025-201ENSMUST00000195159 829 ntBASIC16.34■□□□□ 0.21
Trim42Q9D2H5 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim42Q9D2H5 Slc35b2-207ENSMUST00000226086 850 ntBASIC16.34■□□□□ 0.21
Trim42Q9D2H5 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim42Q9D2H5 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim42Q9D2H5 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim42Q9D2H5 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim42Q9D2H5 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim42Q9D2H5 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim42Q9D2H5 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim42Q9D2H5 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim42Q9D2H5 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim42Q9D2H5 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim42Q9D2H5 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim42Q9D2H5 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim42Q9D2H5 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim42Q9D2H5 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim42Q9D2H5 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trim42Q9D2H5 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.34■□□□□ 0.21
Trim42Q9D2H5 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trim42Q9D2H5 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim42Q9D2H5 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim42Q9D2H5 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim42Q9D2H5 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim42Q9D2H5 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Trim42Q9D2H5 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trim42Q9D2H5 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.33■□□□□ 0.2
Trim42Q9D2H5 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim42Q9D2H5 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim42Q9D2H5 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.33■□□□□ 0.2
Trim42Q9D2H5 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim42Q9D2H5 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Trim42Q9D2H5 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim42Q9D2H5 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC16.33■□□□□ 0.2
Trim42Q9D2H5 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim42Q9D2H5 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim42Q9D2H5 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim42Q9D2H5 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trim42Q9D2H5 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim42Q9D2H5 Dio3-201ENSMUST00000097228 1449 ntBASIC16.33■□□□□ 0.2
Trim42Q9D2H5 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim42Q9D2H5 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim42Q9D2H5 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trim42Q9D2H5 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.33■□□□□ 0.2
Trim42Q9D2H5 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms