Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chaf1bQ9D0N7 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chaf1bQ9D0N7 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chaf1bQ9D0N7 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Chaf1bQ9D0N7 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chaf1bQ9D0N7 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Chaf1bQ9D0N7 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Chaf1bQ9D0N7 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chaf1bQ9D0N7 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chaf1bQ9D0N7 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chaf1bQ9D0N7 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chaf1bQ9D0N7 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Chaf1bQ9D0N7 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chaf1bQ9D0N7 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chaf1bQ9D0N7 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chaf1bQ9D0N7 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chaf1bQ9D0N7 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chaf1bQ9D0N7 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Chaf1bQ9D0N7 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chaf1bQ9D0N7 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chaf1bQ9D0N7 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chaf1bQ9D0N7 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chaf1bQ9D0N7 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chaf1bQ9D0N7 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chaf1bQ9D0N7 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chaf1bQ9D0N7 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chaf1bQ9D0N7 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Chaf1bQ9D0N7 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chaf1bQ9D0N7 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chaf1bQ9D0N7 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
Chaf1bQ9D0N7 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Chaf1bQ9D0N7 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chaf1bQ9D0N7 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Chaf1bQ9D0N7 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chaf1bQ9D0N7 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
Chaf1bQ9D0N7 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chaf1bQ9D0N7 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chaf1bQ9D0N7 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chaf1bQ9D0N7 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chaf1bQ9D0N7 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chaf1bQ9D0N7 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chaf1bQ9D0N7 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chaf1bQ9D0N7 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chaf1bQ9D0N7 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chaf1bQ9D0N7 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chaf1bQ9D0N7 Gm17661-201ENSMUST00000170317 270 ntBASIC15.4■□□□□ 0.06
Chaf1bQ9D0N7 Gm37025-201ENSMUST00000195159 829 ntBASIC15.4■□□□□ 0.06
Chaf1bQ9D0N7 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.4■□□□□ 0.06
Chaf1bQ9D0N7 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Chaf1bQ9D0N7 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chaf1bQ9D0N7 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chaf1bQ9D0N7 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chaf1bQ9D0N7 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chaf1bQ9D0N7 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.4■□□□□ 0.06
Chaf1bQ9D0N7 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chaf1bQ9D0N7 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chaf1bQ9D0N7 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chaf1bQ9D0N7 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chaf1bQ9D0N7 Prob1-201ENSMUST00000097619 3021 ntBASIC15.4■□□□□ 0.06
Chaf1bQ9D0N7 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chaf1bQ9D0N7 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Chaf1bQ9D0N7 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Chaf1bQ9D0N7 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chaf1bQ9D0N7 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Chaf1bQ9D0N7 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Chaf1bQ9D0N7 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chaf1bQ9D0N7 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Chaf1bQ9D0N7 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chaf1bQ9D0N7 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chaf1bQ9D0N7 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chaf1bQ9D0N7 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.39■□□□□ 0.05
Chaf1bQ9D0N7 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Chaf1bQ9D0N7 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.39■□□□□ 0.05
Chaf1bQ9D0N7 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chaf1bQ9D0N7 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chaf1bQ9D0N7 Gm27000-201ENSMUST00000182943 842 ntBASIC15.39■□□□□ 0.05
Chaf1bQ9D0N7 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Chaf1bQ9D0N7 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
Chaf1bQ9D0N7 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chaf1bQ9D0N7 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chaf1bQ9D0N7 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chaf1bQ9D0N7 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chaf1bQ9D0N7 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chaf1bQ9D0N7 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chaf1bQ9D0N7 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Chaf1bQ9D0N7 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Chaf1bQ9D0N7 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chaf1bQ9D0N7 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chaf1bQ9D0N7 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chaf1bQ9D0N7 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chaf1bQ9D0N7 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chaf1bQ9D0N7 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chaf1bQ9D0N7 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Chaf1bQ9D0N7 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chaf1bQ9D0N7 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Chaf1bQ9D0N7 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
Chaf1bQ9D0N7 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Chaf1bQ9D0N7 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Chaf1bQ9D0N7 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Chaf1bQ9D0N7 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms