Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hdhd3Q9CYW4 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hdhd3Q9CYW4 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Hdhd3Q9CYW4 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hdhd3Q9CYW4 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hdhd3Q9CYW4 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC13.35□□□□□ -0.27
Hdhd3Q9CYW4 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hdhd3Q9CYW4 Gm12382-201ENSMUST00000122005 922 ntBASIC13.35□□□□□ -0.27
Hdhd3Q9CYW4 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hdhd3Q9CYW4 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hdhd3Q9CYW4 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC13.35□□□□□ -0.27
Hdhd3Q9CYW4 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hdhd3Q9CYW4 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hdhd3Q9CYW4 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Hdhd3Q9CYW4 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hdhd3Q9CYW4 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hdhd3Q9CYW4 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hdhd3Q9CYW4 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hdhd3Q9CYW4 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hdhd3Q9CYW4 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hdhd3Q9CYW4 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hdhd3Q9CYW4 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hdhd3Q9CYW4 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hdhd3Q9CYW4 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.34□□□□□ -0.27
Hdhd3Q9CYW4 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hdhd3Q9CYW4 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hdhd3Q9CYW4 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Hdhd3Q9CYW4 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hdhd3Q9CYW4 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hdhd3Q9CYW4 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hdhd3Q9CYW4 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Hdhd3Q9CYW4 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hdhd3Q9CYW4 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hdhd3Q9CYW4 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hdhd3Q9CYW4 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Hdhd3Q9CYW4 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hdhd3Q9CYW4 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hdhd3Q9CYW4 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hdhd3Q9CYW4 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hdhd3Q9CYW4 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC13.34□□□□□ -0.27
Hdhd3Q9CYW4 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC13.34□□□□□ -0.27
Hdhd3Q9CYW4 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hdhd3Q9CYW4 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hdhd3Q9CYW4 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Hdhd3Q9CYW4 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hdhd3Q9CYW4 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hdhd3Q9CYW4 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hdhd3Q9CYW4 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Hdhd3Q9CYW4 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hdhd3Q9CYW4 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.34□□□□□ -0.27
Hdhd3Q9CYW4 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hdhd3Q9CYW4 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hdhd3Q9CYW4 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC13.34□□□□□ -0.27
Hdhd3Q9CYW4 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Hdhd3Q9CYW4 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC13.33□□□□□ -0.27
Hdhd3Q9CYW4 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Hdhd3Q9CYW4 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Hdhd3Q9CYW4 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Hdhd3Q9CYW4 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Hdhd3Q9CYW4 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hdhd3Q9CYW4 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hdhd3Q9CYW4 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hdhd3Q9CYW4 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hdhd3Q9CYW4 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hdhd3Q9CYW4 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hdhd3Q9CYW4 Gm27000-201ENSMUST00000182943 842 ntBASIC13.33□□□□□ -0.28
Hdhd3Q9CYW4 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC13.33□□□□□ -0.28
Hdhd3Q9CYW4 Gm37292-201ENSMUST00000192062 758 ntBASIC13.33□□□□□ -0.28
Hdhd3Q9CYW4 Gm9694-201ENSMUST00000193347 1189 ntBASIC13.33□□□□□ -0.28
Hdhd3Q9CYW4 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hdhd3Q9CYW4 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Hdhd3Q9CYW4 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.33□□□□□ -0.28
Hdhd3Q9CYW4 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hdhd3Q9CYW4 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hdhd3Q9CYW4 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hdhd3Q9CYW4 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hdhd3Q9CYW4 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hdhd3Q9CYW4 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.33□□□□□ -0.28
Hdhd3Q9CYW4 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.28
Hdhd3Q9CYW4 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hdhd3Q9CYW4 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hdhd3Q9CYW4 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Hdhd3Q9CYW4 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hdhd3Q9CYW4 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hdhd3Q9CYW4 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hdhd3Q9CYW4 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hdhd3Q9CYW4 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hdhd3Q9CYW4 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC13.32□□□□□ -0.28
Hdhd3Q9CYW4 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hdhd3Q9CYW4 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hdhd3Q9CYW4 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.32□□□□□ -0.28
Hdhd3Q9CYW4 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hdhd3Q9CYW4 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hdhd3Q9CYW4 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hdhd3Q9CYW4 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hdhd3Q9CYW4 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hdhd3Q9CYW4 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hdhd3Q9CYW4 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hdhd3Q9CYW4 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hdhd3Q9CYW4 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms