Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.14■□□□□ 0.01
Trim13Q9CYB0 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Trim13Q9CYB0 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim13Q9CYB0 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim13Q9CYB0 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC15.14■□□□□ 0.01
Trim13Q9CYB0 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Trim13Q9CYB0 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC15.14■□□□□ 0.01
Trim13Q9CYB0 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.14■□□□□ 0.01
Trim13Q9CYB0 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.14■□□□□ 0.01
Trim13Q9CYB0 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trim13Q9CYB0 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.14■□□□□ 0.01
Trim13Q9CYB0 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
Trim13Q9CYB0 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim13Q9CYB0 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim13Q9CYB0 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim13Q9CYB0 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim13Q9CYB0 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim13Q9CYB0 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim13Q9CYB0 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim13Q9CYB0 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim13Q9CYB0 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.13■□□□□ 0.01
Trim13Q9CYB0 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim13Q9CYB0 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim13Q9CYB0 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim13Q9CYB0 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Trim13Q9CYB0 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim13Q9CYB0 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim13Q9CYB0 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.13■□□□□ 0.01
Trim13Q9CYB0 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.13■□□□□ 0.01
Trim13Q9CYB0 Gm37025-201ENSMUST00000195159 829 ntBASIC15.13■□□□□ 0.01
Trim13Q9CYB0 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim13Q9CYB0 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim13Q9CYB0 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim13Q9CYB0 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim13Q9CYB0 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim13Q9CYB0 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim13Q9CYB0 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Trim13Q9CYB0 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trim13Q9CYB0 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trim13Q9CYB0 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim13Q9CYB0 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim13Q9CYB0 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim13Q9CYB0 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim13Q9CYB0 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim13Q9CYB0 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim13Q9CYB0 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim13Q9CYB0 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim13Q9CYB0 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim13Q9CYB0 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim13Q9CYB0 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim13Q9CYB0 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.12■□□□□ 0.01
Trim13Q9CYB0 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim13Q9CYB0 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim13Q9CYB0 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim13Q9CYB0 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim13Q9CYB0 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim13Q9CYB0 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim13Q9CYB0 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim13Q9CYB0 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim13Q9CYB0 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim13Q9CYB0 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim13Q9CYB0 Gm12669-201ENSMUST00000122162 1009 ntBASIC15.12■□□□□ 0.01
Trim13Q9CYB0 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim13Q9CYB0 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim13Q9CYB0 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim13Q9CYB0 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC15.12■□□□□ 0.01
Trim13Q9CYB0 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim13Q9CYB0 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim13Q9CYB0 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim13Q9CYB0 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trim13Q9CYB0 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim13Q9CYB0 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim13Q9CYB0 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim13Q9CYB0 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trim13Q9CYB0 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Trim13Q9CYB0 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.12■□□□□ 0.01
Trim13Q9CYB0 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trim13Q9CYB0 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim13Q9CYB0 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim13Q9CYB0 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trim13Q9CYB0 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim13Q9CYB0 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim13Q9CYB0 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim13Q9CYB0 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.11■□□□□ 0.01
Trim13Q9CYB0 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC15.11■□□□□ 0.01
Trim13Q9CYB0 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim13Q9CYB0 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim13Q9CYB0 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trim13Q9CYB0 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim13Q9CYB0 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim13Q9CYB0 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC15.11■□□□□ 0.01
Trim13Q9CYB0 Spcs1-207ENSMUST00000228767 1008 ntBASIC15.11■□□□□ 0.01
Trim13Q9CYB0 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim13Q9CYB0 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim13Q9CYB0 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim13Q9CYB0 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim13Q9CYB0 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim13Q9CYB0 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.11■□□□□ 0.01
Trim13Q9CYB0 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim13Q9CYB0 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms