Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Chd1lQ9CXF7 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
Chd1lQ9CXF7 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
Chd1lQ9CXF7 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
Chd1lQ9CXF7 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Chd1lQ9CXF7 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chd1lQ9CXF7 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chd1lQ9CXF7 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chd1lQ9CXF7 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chd1lQ9CXF7 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
Chd1lQ9CXF7 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Chd1lQ9CXF7 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Chd1lQ9CXF7 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chd1lQ9CXF7 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chd1lQ9CXF7 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chd1lQ9CXF7 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC18.5■□□□□ 0.55
Chd1lQ9CXF7 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chd1lQ9CXF7 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Chd1lQ9CXF7 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chd1lQ9CXF7 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chd1lQ9CXF7 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chd1lQ9CXF7 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chd1lQ9CXF7 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chd1lQ9CXF7 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chd1lQ9CXF7 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chd1lQ9CXF7 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chd1lQ9CXF7 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.5■□□□□ 0.55
Chd1lQ9CXF7 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC18.5■□□□□ 0.55
Chd1lQ9CXF7 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.5■□□□□ 0.55
Chd1lQ9CXF7 Gm43598-201ENSMUST00000202482 2479 ntBASIC18.5■□□□□ 0.55
Chd1lQ9CXF7 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chd1lQ9CXF7 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chd1lQ9CXF7 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Chd1lQ9CXF7 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chd1lQ9CXF7 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chd1lQ9CXF7 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Chd1lQ9CXF7 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chd1lQ9CXF7 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chd1lQ9CXF7 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chd1lQ9CXF7 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chd1lQ9CXF7 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Chd1lQ9CXF7 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
Chd1lQ9CXF7 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Chd1lQ9CXF7 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
Chd1lQ9CXF7 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC18.49■□□□□ 0.55
Chd1lQ9CXF7 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Chd1lQ9CXF7 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chd1lQ9CXF7 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chd1lQ9CXF7 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Chd1lQ9CXF7 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chd1lQ9CXF7 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Chd1lQ9CXF7 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Chd1lQ9CXF7 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chd1lQ9CXF7 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chd1lQ9CXF7 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chd1lQ9CXF7 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Chd1lQ9CXF7 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Chd1lQ9CXF7 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chd1lQ9CXF7 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Chd1lQ9CXF7 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chd1lQ9CXF7 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chd1lQ9CXF7 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chd1lQ9CXF7 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.48■□□□□ 0.55
Chd1lQ9CXF7 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chd1lQ9CXF7 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chd1lQ9CXF7 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.48■□□□□ 0.55
Chd1lQ9CXF7 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chd1lQ9CXF7 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Chd1lQ9CXF7 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Chd1lQ9CXF7 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC18.48■□□□□ 0.55
Chd1lQ9CXF7 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Chd1lQ9CXF7 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chd1lQ9CXF7 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Chd1lQ9CXF7 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chd1lQ9CXF7 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
Chd1lQ9CXF7 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chd1lQ9CXF7 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Chd1lQ9CXF7 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chd1lQ9CXF7 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chd1lQ9CXF7 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Chd1lQ9CXF7 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Chd1lQ9CXF7 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.47■□□□□ 0.55
Chd1lQ9CXF7 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.47■□□□□ 0.55
Chd1lQ9CXF7 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC18.47■□□□□ 0.55
Chd1lQ9CXF7 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chd1lQ9CXF7 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC18.47■□□□□ 0.55
Chd1lQ9CXF7 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chd1lQ9CXF7 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chd1lQ9CXF7 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chd1lQ9CXF7 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chd1lQ9CXF7 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chd1lQ9CXF7 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Chd1lQ9CXF7 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chd1lQ9CXF7 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC18.46■□□□□ 0.55
Chd1lQ9CXF7 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chd1lQ9CXF7 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chd1lQ9CXF7 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Chd1lQ9CXF7 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chd1lQ9CXF7 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Chd1lQ9CXF7 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC18.46■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms