Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx47Q9CWX9 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx47Q9CWX9 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC16.85■□□□□ 0.29
Ddx47Q9CWX9 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx47Q9CWX9 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx47Q9CWX9 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx47Q9CWX9 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx47Q9CWX9 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx47Q9CWX9 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.85■□□□□ 0.29
Ddx47Q9CWX9 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx47Q9CWX9 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx47Q9CWX9 Gm37292-201ENSMUST00000192062 758 ntBASIC16.85■□□□□ 0.29
Ddx47Q9CWX9 Gm37179-201ENSMUST00000194862 823 ntBASIC16.85■□□□□ 0.29
Ddx47Q9CWX9 Gm37025-201ENSMUST00000195159 829 ntBASIC16.85■□□□□ 0.29
Ddx47Q9CWX9 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx47Q9CWX9 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx47Q9CWX9 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx47Q9CWX9 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.85■□□□□ 0.29
Ddx47Q9CWX9 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx47Q9CWX9 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx47Q9CWX9 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx47Q9CWX9 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Ddx47Q9CWX9 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx47Q9CWX9 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx47Q9CWX9 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Ddx47Q9CWX9 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx47Q9CWX9 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx47Q9CWX9 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx47Q9CWX9 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx47Q9CWX9 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx47Q9CWX9 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx47Q9CWX9 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx47Q9CWX9 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC16.84■□□□□ 0.29
Ddx47Q9CWX9 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx47Q9CWX9 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.84■□□□□ 0.29
Ddx47Q9CWX9 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx47Q9CWX9 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx47Q9CWX9 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx47Q9CWX9 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx47Q9CWX9 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx47Q9CWX9 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx47Q9CWX9 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx47Q9CWX9 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx47Q9CWX9 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx47Q9CWX9 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx47Q9CWX9 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx47Q9CWX9 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx47Q9CWX9 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx47Q9CWX9 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx47Q9CWX9 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx47Q9CWX9 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx47Q9CWX9 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.84■□□□□ 0.29
Ddx47Q9CWX9 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx47Q9CWX9 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx47Q9CWX9 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx47Q9CWX9 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx47Q9CWX9 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Ddx47Q9CWX9 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ddx47Q9CWX9 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ddx47Q9CWX9 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.83■□□□□ 0.28
Ddx47Q9CWX9 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx47Q9CWX9 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx47Q9CWX9 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
Ddx47Q9CWX9 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx47Q9CWX9 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx47Q9CWX9 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Ddx47Q9CWX9 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx47Q9CWX9 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx47Q9CWX9 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.83■□□□□ 0.28
Ddx47Q9CWX9 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC16.83■□□□□ 0.28
Ddx47Q9CWX9 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx47Q9CWX9 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx47Q9CWX9 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx47Q9CWX9 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx47Q9CWX9 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx47Q9CWX9 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx47Q9CWX9 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx47Q9CWX9 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.83■□□□□ 0.28
Ddx47Q9CWX9 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx47Q9CWX9 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx47Q9CWX9 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ddx47Q9CWX9 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Ddx47Q9CWX9 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx47Q9CWX9 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx47Q9CWX9 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx47Q9CWX9 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx47Q9CWX9 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx47Q9CWX9 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ddx47Q9CWX9 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Ddx47Q9CWX9 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.82■□□□□ 0.28
Ddx47Q9CWX9 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx47Q9CWX9 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx47Q9CWX9 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.82■□□□□ 0.28
Ddx47Q9CWX9 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx47Q9CWX9 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx47Q9CWX9 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx47Q9CWX9 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx47Q9CWX9 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ddx47Q9CWX9 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.82■□□□□ 0.28
Ddx47Q9CWX9 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms