Protein–RNA interactions for Protein: Q9CTH6

Fcf1, rRNA-processing protein FCF1 homolog, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fcf1Q9CTH6 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Fcf1Q9CTH6 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Fcf1Q9CTH6 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Fcf1Q9CTH6 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.42■□□□□ 0.22
Fcf1Q9CTH6 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Fcf1Q9CTH6 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.42■□□□□ 0.22
Fcf1Q9CTH6 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC16.42■□□□□ 0.22
Fcf1Q9CTH6 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.42■□□□□ 0.22
Fcf1Q9CTH6 Gm17971-201ENSMUST00000190239 806 ntBASIC16.42■□□□□ 0.22
Fcf1Q9CTH6 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.42■□□□□ 0.22
Fcf1Q9CTH6 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.42■□□□□ 0.22
Fcf1Q9CTH6 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Fcf1Q9CTH6 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Fcf1Q9CTH6 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Fcf1Q9CTH6 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Fcf1Q9CTH6 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Fcf1Q9CTH6 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Fcf1Q9CTH6 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Fcf1Q9CTH6 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Fcf1Q9CTH6 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Fcf1Q9CTH6 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Fcf1Q9CTH6 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Fcf1Q9CTH6 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Fcf1Q9CTH6 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Fcf1Q9CTH6 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Fcf1Q9CTH6 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Fcf1Q9CTH6 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Fcf1Q9CTH6 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Fcf1Q9CTH6 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Fcf1Q9CTH6 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Fcf1Q9CTH6 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Fcf1Q9CTH6 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Fcf1Q9CTH6 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Fcf1Q9CTH6 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Fcf1Q9CTH6 Gm36967-201ENSMUST00000193814 266 ntBASIC16.41■□□□□ 0.22
Fcf1Q9CTH6 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Fcf1Q9CTH6 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.41■□□□□ 0.22
Fcf1Q9CTH6 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Fcf1Q9CTH6 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Fcf1Q9CTH6 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.41■□□□□ 0.22
Fcf1Q9CTH6 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Fcf1Q9CTH6 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Fcf1Q9CTH6 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Fcf1Q9CTH6 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Fcf1Q9CTH6 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Fcf1Q9CTH6 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Fcf1Q9CTH6 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Fcf1Q9CTH6 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Fcf1Q9CTH6 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Fcf1Q9CTH6 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Fcf1Q9CTH6 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Fcf1Q9CTH6 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Fcf1Q9CTH6 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.4■□□□□ 0.22
Fcf1Q9CTH6 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Fcf1Q9CTH6 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Fcf1Q9CTH6 Gm13312-201ENSMUST00000119631 718 ntBASIC16.4■□□□□ 0.22
Fcf1Q9CTH6 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Fcf1Q9CTH6 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.4■□□□□ 0.22
Fcf1Q9CTH6 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Fcf1Q9CTH6 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.4■□□□□ 0.22
Fcf1Q9CTH6 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Fcf1Q9CTH6 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Fcf1Q9CTH6 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Fcf1Q9CTH6 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Fcf1Q9CTH6 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Fcf1Q9CTH6 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Fcf1Q9CTH6 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Fcf1Q9CTH6 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Fcf1Q9CTH6 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Fcf1Q9CTH6 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Fcf1Q9CTH6 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Fcf1Q9CTH6 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Fcf1Q9CTH6 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Fcf1Q9CTH6 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Fcf1Q9CTH6 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Fcf1Q9CTH6 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Fcf1Q9CTH6 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Fcf1Q9CTH6 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Fcf1Q9CTH6 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Fcf1Q9CTH6 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Fcf1Q9CTH6 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Fcf1Q9CTH6 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Fcf1Q9CTH6 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Fcf1Q9CTH6 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Fcf1Q9CTH6 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Fcf1Q9CTH6 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Fcf1Q9CTH6 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Fcf1Q9CTH6 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Fcf1Q9CTH6 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Fcf1Q9CTH6 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Fcf1Q9CTH6 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Fcf1Q9CTH6 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Fcf1Q9CTH6 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Fcf1Q9CTH6 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.38■□□□□ 0.21
Fcf1Q9CTH6 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Fcf1Q9CTH6 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Fcf1Q9CTH6 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Fcf1Q9CTH6 Gm12895-201ENSMUST00000122214 226 ntBASIC16.38■□□□□ 0.21
Fcf1Q9CTH6 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.38■□□□□ 0.21
Fcf1Q9CTH6 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms