Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Cldnd1Q9CQX5 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cldnd1Q9CQX5 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cldnd1Q9CQX5 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cldnd1Q9CQX5 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cldnd1Q9CQX5 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cldnd1Q9CQX5 Gm27646-201ENSMUST00000183989 110 ntBASIC16.68■□□□□ 0.26
Cldnd1Q9CQX5 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.68■□□□□ 0.26
Cldnd1Q9CQX5 Gm5186-201ENSMUST00000218781 920 ntBASIC16.68■□□□□ 0.26
Cldnd1Q9CQX5 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.68■□□□□ 0.26
Cldnd1Q9CQX5 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cldnd1Q9CQX5 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cldnd1Q9CQX5 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cldnd1Q9CQX5 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cldnd1Q9CQX5 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cldnd1Q9CQX5 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cldnd1Q9CQX5 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cldnd1Q9CQX5 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cldnd1Q9CQX5 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cldnd1Q9CQX5 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cldnd1Q9CQX5 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC16.68■□□□□ 0.26
Cldnd1Q9CQX5 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cldnd1Q9CQX5 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cldnd1Q9CQX5 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cldnd1Q9CQX5 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cldnd1Q9CQX5 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cldnd1Q9CQX5 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cldnd1Q9CQX5 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cldnd1Q9CQX5 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cldnd1Q9CQX5 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cldnd1Q9CQX5 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cldnd1Q9CQX5 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cldnd1Q9CQX5 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Cldnd1Q9CQX5 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.67■□□□□ 0.26
Cldnd1Q9CQX5 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC16.67■□□□□ 0.26
Cldnd1Q9CQX5 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Cldnd1Q9CQX5 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC16.67■□□□□ 0.26
Cldnd1Q9CQX5 Gm5682-201ENSMUST00000173402 505 ntBASIC16.67■□□□□ 0.26
Cldnd1Q9CQX5 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.67■□□□□ 0.26
Cldnd1Q9CQX5 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cldnd1Q9CQX5 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cldnd1Q9CQX5 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cldnd1Q9CQX5 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cldnd1Q9CQX5 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cldnd1Q9CQX5 Gm5112-201ENSMUST00000204407 2368 ntBASIC16.67■□□□□ 0.26
Cldnd1Q9CQX5 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cldnd1Q9CQX5 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cldnd1Q9CQX5 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cldnd1Q9CQX5 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldnd1Q9CQX5 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldnd1Q9CQX5 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldnd1Q9CQX5 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Cldnd1Q9CQX5 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.66■□□□□ 0.26
Cldnd1Q9CQX5 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Cldnd1Q9CQX5 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Cldnd1Q9CQX5 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.66■□□□□ 0.26
Cldnd1Q9CQX5 Gm18622-201ENSMUST00000219361 595 ntBASIC16.66■□□□□ 0.26
Cldnd1Q9CQX5 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldnd1Q9CQX5 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldnd1Q9CQX5 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.66■□□□□ 0.26
Cldnd1Q9CQX5 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldnd1Q9CQX5 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.66■□□□□ 0.26
Cldnd1Q9CQX5 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldnd1Q9CQX5 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldnd1Q9CQX5 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldnd1Q9CQX5 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldnd1Q9CQX5 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Cldnd1Q9CQX5 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldnd1Q9CQX5 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cldnd1Q9CQX5 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldnd1Q9CQX5 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.65■□□□□ 0.26
Cldnd1Q9CQX5 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldnd1Q9CQX5 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cldnd1Q9CQX5 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cldnd1Q9CQX5 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.65■□□□□ 0.26
Cldnd1Q9CQX5 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldnd1Q9CQX5 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldnd1Q9CQX5 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldnd1Q9CQX5 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldnd1Q9CQX5 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC16.65■□□□□ 0.26
Cldnd1Q9CQX5 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldnd1Q9CQX5 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cldnd1Q9CQX5 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldnd1Q9CQX5 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cldnd1Q9CQX5 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldnd1Q9CQX5 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Cldnd1Q9CQX5 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.65■□□□□ 0.26
Cldnd1Q9CQX5 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Cldnd1Q9CQX5 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Cldnd1Q9CQX5 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
Cldnd1Q9CQX5 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Cldnd1Q9CQX5 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cldnd1Q9CQX5 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Cldnd1Q9CQX5 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Cldnd1Q9CQX5 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.64■□□□□ 0.25
Cldnd1Q9CQX5 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Cldnd1Q9CQX5 Mir6956-201ENSMUST00000183598 62 ntBASIC16.64■□□□□ 0.25
Cldnd1Q9CQX5 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Cldnd1Q9CQX5 Gm45167-201ENSMUST00000208007 322 ntBASIC16.64■□□□□ 0.25
Cldnd1Q9CQX5 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms