Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm7Q9CQQ8 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Lsm7Q9CQQ8 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm7Q9CQQ8 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm7Q9CQQ8 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm7Q9CQQ8 Gm12644-201ENSMUST00000119935 606 ntBASIC16.48■□□□□ 0.23
Lsm7Q9CQQ8 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.48■□□□□ 0.23
Lsm7Q9CQQ8 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm7Q9CQQ8 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm7Q9CQQ8 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.48■□□□□ 0.23
Lsm7Q9CQQ8 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.48■□□□□ 0.23
Lsm7Q9CQQ8 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm7Q9CQQ8 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm7Q9CQQ8 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm7Q9CQQ8 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Lsm7Q9CQQ8 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm7Q9CQQ8 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm7Q9CQQ8 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm7Q9CQQ8 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Lsm7Q9CQQ8 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm7Q9CQQ8 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm7Q9CQQ8 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm7Q9CQQ8 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm7Q9CQQ8 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
Lsm7Q9CQQ8 Gm15165-201ENSMUST00000118140 502 ntBASIC16.47■□□□□ 0.23
Lsm7Q9CQQ8 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm7Q9CQQ8 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm7Q9CQQ8 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.47■□□□□ 0.23
Lsm7Q9CQQ8 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm7Q9CQQ8 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm7Q9CQQ8 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm7Q9CQQ8 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.47■□□□□ 0.23
Lsm7Q9CQQ8 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Lsm7Q9CQQ8 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Lsm7Q9CQQ8 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
Lsm7Q9CQQ8 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Lsm7Q9CQQ8 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.46■□□□□ 0.23
Lsm7Q9CQQ8 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lsm7Q9CQQ8 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lsm7Q9CQQ8 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Lsm7Q9CQQ8 Gm27459-201ENSMUST00000184860 107 ntBASIC16.46■□□□□ 0.23
Lsm7Q9CQQ8 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Lsm7Q9CQQ8 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.46■□□□□ 0.23
Lsm7Q9CQQ8 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lsm7Q9CQQ8 Gm7461-201ENSMUST00000058918 827 ntBASIC16.46■□□□□ 0.23
Lsm7Q9CQQ8 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.46■□□□□ 0.23
Lsm7Q9CQQ8 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Lsm7Q9CQQ8 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Lsm7Q9CQQ8 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Lsm7Q9CQQ8 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lsm7Q9CQQ8 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Lsm7Q9CQQ8 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Lsm7Q9CQQ8 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Lsm7Q9CQQ8 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Lsm7Q9CQQ8 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Lsm7Q9CQQ8 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Lsm7Q9CQQ8 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Lsm7Q9CQQ8 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsm7Q9CQQ8 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsm7Q9CQQ8 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsm7Q9CQQ8 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Lsm7Q9CQQ8 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsm7Q9CQQ8 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.45■□□□□ 0.22
Lsm7Q9CQQ8 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Lsm7Q9CQQ8 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Lsm7Q9CQQ8 Gm28659-201ENSMUST00000188013 759 ntBASIC16.45■□□□□ 0.22
Lsm7Q9CQQ8 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsm7Q9CQQ8 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsm7Q9CQQ8 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.45■□□□□ 0.22
Lsm7Q9CQQ8 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Lsm7Q9CQQ8 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsm7Q9CQQ8 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Lsm7Q9CQQ8 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC16.45■□□□□ 0.22
Lsm7Q9CQQ8 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Lsm7Q9CQQ8 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsm7Q9CQQ8 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsm7Q9CQQ8 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lsm7Q9CQQ8 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Lsm7Q9CQQ8 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.44■□□□□ 0.22
Lsm7Q9CQQ8 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.44■□□□□ 0.22
Lsm7Q9CQQ8 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Lsm7Q9CQQ8 Gm36967-201ENSMUST00000193814 266 ntBASIC16.44■□□□□ 0.22
Lsm7Q9CQQ8 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.44■□□□□ 0.22
Lsm7Q9CQQ8 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsm7Q9CQQ8 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsm7Q9CQQ8 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsm7Q9CQQ8 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsm7Q9CQQ8 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Lsm7Q9CQQ8 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Lsm7Q9CQQ8 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsm7Q9CQQ8 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsm7Q9CQQ8 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Lsm7Q9CQQ8 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Lsm7Q9CQQ8 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Lsm7Q9CQQ8 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Lsm7Q9CQQ8 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lsm7Q9CQQ8 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lsm7Q9CQQ8 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lsm7Q9CQQ8 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Lsm7Q9CQQ8 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms