Protein–RNA interactions for Protein: Q9CQI6

Cotl1, Coactosin-like protein, mousemouse

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cotl1Q9CQI6 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cotl1Q9CQI6 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Cotl1Q9CQI6 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cotl1Q9CQI6 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cotl1Q9CQI6 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cotl1Q9CQI6 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cotl1Q9CQI6 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cotl1Q9CQI6 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cotl1Q9CQI6 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cotl1Q9CQI6 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cotl1Q9CQI6 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC12.88□□□□□ -0.35
Cotl1Q9CQI6 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cotl1Q9CQI6 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cotl1Q9CQI6 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cotl1Q9CQI6 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cotl1Q9CQI6 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cotl1Q9CQI6 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cotl1Q9CQI6 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cotl1Q9CQI6 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cotl1Q9CQI6 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cotl1Q9CQI6 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Cotl1Q9CQI6 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC12.87□□□□□ -0.35
Cotl1Q9CQI6 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC12.87□□□□□ -0.35
Cotl1Q9CQI6 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cotl1Q9CQI6 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cotl1Q9CQI6 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cotl1Q9CQI6 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cotl1Q9CQI6 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cotl1Q9CQI6 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cotl1Q9CQI6 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cotl1Q9CQI6 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cotl1Q9CQI6 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cotl1Q9CQI6 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Cotl1Q9CQI6 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cotl1Q9CQI6 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cotl1Q9CQI6 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cotl1Q9CQI6 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cotl1Q9CQI6 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Cotl1Q9CQI6 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cotl1Q9CQI6 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.87□□□□□ -0.35
Cotl1Q9CQI6 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cotl1Q9CQI6 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Cotl1Q9CQI6 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC12.87□□□□□ -0.35
Cotl1Q9CQI6 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cotl1Q9CQI6 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Cotl1Q9CQI6 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cotl1Q9CQI6 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cotl1Q9CQI6 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Cotl1Q9CQI6 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cotl1Q9CQI6 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Cotl1Q9CQI6 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cotl1Q9CQI6 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cotl1Q9CQI6 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC12.86□□□□□ -0.35
Cotl1Q9CQI6 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cotl1Q9CQI6 Gm10849-201ENSMUST00000100397 618 ntBASIC12.86□□□□□ -0.35
Cotl1Q9CQI6 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cotl1Q9CQI6 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cotl1Q9CQI6 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cotl1Q9CQI6 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC12.86□□□□□ -0.35
Cotl1Q9CQI6 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC12.86□□□□□ -0.35
Cotl1Q9CQI6 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cotl1Q9CQI6 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC12.86□□□□□ -0.35
Cotl1Q9CQI6 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cotl1Q9CQI6 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cotl1Q9CQI6 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cotl1Q9CQI6 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cotl1Q9CQI6 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cotl1Q9CQI6 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cotl1Q9CQI6 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cotl1Q9CQI6 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Cotl1Q9CQI6 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Cotl1Q9CQI6 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cotl1Q9CQI6 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Cotl1Q9CQI6 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC12.85□□□□□ -0.35
Cotl1Q9CQI6 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cotl1Q9CQI6 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cotl1Q9CQI6 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Cotl1Q9CQI6 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Cotl1Q9CQI6 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC12.85□□□□□ -0.35
Cotl1Q9CQI6 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.85□□□□□ -0.35
Cotl1Q9CQI6 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Cotl1Q9CQI6 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cotl1Q9CQI6 Gm38285-201ENSMUST00000192928 922 ntBASIC12.85□□□□□ -0.35
Cotl1Q9CQI6 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cotl1Q9CQI6 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC12.85□□□□□ -0.35
Cotl1Q9CQI6 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cotl1Q9CQI6 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cotl1Q9CQI6 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cotl1Q9CQI6 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cotl1Q9CQI6 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cotl1Q9CQI6 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cotl1Q9CQI6 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cotl1Q9CQI6 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cotl1Q9CQI6 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Cotl1Q9CQI6 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cotl1Q9CQI6 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cotl1Q9CQI6 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cotl1Q9CQI6 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cotl1Q9CQI6 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC12.85□□□□□ -0.35
Cotl1Q9CQI6 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms