Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb1Q9CQ70 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb1Q9CQ70 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
H2afb1Q9CQ70 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
H2afb1Q9CQ70 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb1Q9CQ70 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb1Q9CQ70 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
H2afb1Q9CQ70 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb1Q9CQ70 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb1Q9CQ70 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb1Q9CQ70 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb1Q9CQ70 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb1Q9CQ70 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC13.37□□□□□ -0.27
H2afb1Q9CQ70 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
H2afb1Q9CQ70 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb1Q9CQ70 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.37□□□□□ -0.27
H2afb1Q9CQ70 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb1Q9CQ70 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb1Q9CQ70 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
H2afb1Q9CQ70 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC13.37□□□□□ -0.27
H2afb1Q9CQ70 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
H2afb1Q9CQ70 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
H2afb1Q9CQ70 Dancr-204ENSMUST00000132389 2347 ntBASIC13.36□□□□□ -0.27
H2afb1Q9CQ70 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb1Q9CQ70 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC13.36□□□□□ -0.27
H2afb1Q9CQ70 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.36□□□□□ -0.27
H2afb1Q9CQ70 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb1Q9CQ70 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb1Q9CQ70 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb1Q9CQ70 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb1Q9CQ70 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb1Q9CQ70 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC13.36□□□□□ -0.27
H2afb1Q9CQ70 Gm13436-201ENSMUST00000120418 567 ntBASIC13.36□□□□□ -0.27
H2afb1Q9CQ70 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
H2afb1Q9CQ70 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC13.36□□□□□ -0.27
H2afb1Q9CQ70 Gm9484-201ENSMUST00000195892 1159 ntBASIC13.36□□□□□ -0.27
H2afb1Q9CQ70 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC13.36□□□□□ -0.27
H2afb1Q9CQ70 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
H2afb1Q9CQ70 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb1Q9CQ70 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb1Q9CQ70 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb1Q9CQ70 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb1Q9CQ70 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb1Q9CQ70 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
H2afb1Q9CQ70 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
H2afb1Q9CQ70 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb1Q9CQ70 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb1Q9CQ70 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb1Q9CQ70 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb1Q9CQ70 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb1Q9CQ70 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
H2afb1Q9CQ70 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb1Q9CQ70 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb1Q9CQ70 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb1Q9CQ70 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb1Q9CQ70 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
H2afb1Q9CQ70 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb1Q9CQ70 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb1Q9CQ70 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
H2afb1Q9CQ70 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb1Q9CQ70 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb1Q9CQ70 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb1Q9CQ70 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb1Q9CQ70 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb1Q9CQ70 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb1Q9CQ70 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
H2afb1Q9CQ70 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb1Q9CQ70 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb1Q9CQ70 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb1Q9CQ70 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb1Q9CQ70 Gm11336-201ENSMUST00000118168 334 ntBASIC13.35□□□□□ -0.27
H2afb1Q9CQ70 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC13.35□□□□□ -0.27
H2afb1Q9CQ70 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb1Q9CQ70 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb1Q9CQ70 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb1Q9CQ70 Mir1668-201ENSMUST00000184114 107 ntBASIC13.35□□□□□ -0.27
H2afb1Q9CQ70 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb1Q9CQ70 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb1Q9CQ70 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb1Q9CQ70 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb1Q9CQ70 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb1Q9CQ70 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb1Q9CQ70 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb1Q9CQ70 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb1Q9CQ70 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb1Q9CQ70 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb1Q9CQ70 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb1Q9CQ70 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb1Q9CQ70 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.35□□□□□ -0.27
H2afb1Q9CQ70 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb1Q9CQ70 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb1Q9CQ70 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb1Q9CQ70 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb1Q9CQ70 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC13.35□□□□□ -0.27
H2afb1Q9CQ70 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb1Q9CQ70 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb1Q9CQ70 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
H2afb1Q9CQ70 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
H2afb1Q9CQ70 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC13.34□□□□□ -0.27
H2afb1Q9CQ70 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms