Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Msh4Q99MT2 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.93■□□□□ 0.14
Msh4Q99MT2 Gm6345-202ENSMUST00000180900 204 ntBASIC15.93■□□□□ 0.14
Msh4Q99MT2 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.93■□□□□ 0.14
Msh4Q99MT2 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Msh4Q99MT2 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Msh4Q99MT2 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Msh4Q99MT2 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Msh4Q99MT2 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Msh4Q99MT2 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Msh4Q99MT2 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Msh4Q99MT2 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC15.93■□□□□ 0.14
Msh4Q99MT2 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Msh4Q99MT2 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Msh4Q99MT2 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.92■□□□□ 0.14
Msh4Q99MT2 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Msh4Q99MT2 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msh4Q99MT2 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Msh4Q99MT2 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Msh4Q99MT2 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.92■□□□□ 0.14
Msh4Q99MT2 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC15.92■□□□□ 0.14
Msh4Q99MT2 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Msh4Q99MT2 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
Msh4Q99MT2 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msh4Q99MT2 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Msh4Q99MT2 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msh4Q99MT2 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msh4Q99MT2 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Msh4Q99MT2 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msh4Q99MT2 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msh4Q99MT2 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msh4Q99MT2 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msh4Q99MT2 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Msh4Q99MT2 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msh4Q99MT2 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Msh4Q99MT2 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msh4Q99MT2 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.91■□□□□ 0.14
Msh4Q99MT2 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msh4Q99MT2 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Msh4Q99MT2 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Msh4Q99MT2 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC15.91■□□□□ 0.14
Msh4Q99MT2 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msh4Q99MT2 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Msh4Q99MT2 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
Msh4Q99MT2 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msh4Q99MT2 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msh4Q99MT2 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.91■□□□□ 0.14
Msh4Q99MT2 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Msh4Q99MT2 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msh4Q99MT2 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msh4Q99MT2 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Msh4Q99MT2 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msh4Q99MT2 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Msh4Q99MT2 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.91■□□□□ 0.14
Msh4Q99MT2 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Msh4Q99MT2 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msh4Q99MT2 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Msh4Q99MT2 Dancr-204ENSMUST00000132389 2347 ntBASIC15.9■□□□□ 0.14
Msh4Q99MT2 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msh4Q99MT2 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msh4Q99MT2 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Msh4Q99MT2 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Msh4Q99MT2 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.9■□□□□ 0.14
Msh4Q99MT2 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msh4Q99MT2 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msh4Q99MT2 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Msh4Q99MT2 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Msh4Q99MT2 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msh4Q99MT2 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Msh4Q99MT2 Gm25016-201ENSMUST00000158399 131 ntBASIC15.9■□□□□ 0.14
Msh4Q99MT2 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msh4Q99MT2 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Msh4Q99MT2 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msh4Q99MT2 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.9■□□□□ 0.14
Msh4Q99MT2 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.9■□□□□ 0.14
Msh4Q99MT2 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msh4Q99MT2 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msh4Q99MT2 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Msh4Q99MT2 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Msh4Q99MT2 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.9■□□□□ 0.14
Msh4Q99MT2 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Msh4Q99MT2 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msh4Q99MT2 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
Msh4Q99MT2 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Msh4Q99MT2 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msh4Q99MT2 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msh4Q99MT2 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msh4Q99MT2 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Msh4Q99MT2 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Msh4Q99MT2 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msh4Q99MT2 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msh4Q99MT2 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msh4Q99MT2 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC15.89■□□□□ 0.13
Msh4Q99MT2 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msh4Q99MT2 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msh4Q99MT2 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msh4Q99MT2 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Msh4Q99MT2 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Msh4Q99MT2 Gm11355-201ENSMUST00000121120 306 ntBASIC15.89■□□□□ 0.13
Msh4Q99MT2 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms