Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col25a1Q99MQ5 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col25a1Q99MQ5 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col25a1Q99MQ5 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col25a1Q99MQ5 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col25a1Q99MQ5 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Col25a1Q99MQ5 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col25a1Q99MQ5 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col25a1Q99MQ5 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Col25a1Q99MQ5 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
Col25a1Q99MQ5 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC16.88■□□□□ 0.29
Col25a1Q99MQ5 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC16.88■□□□□ 0.29
Col25a1Q99MQ5 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC16.88■□□□□ 0.29
Col25a1Q99MQ5 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC16.88■□□□□ 0.29
Col25a1Q99MQ5 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Col25a1Q99MQ5 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC16.88■□□□□ 0.29
Col25a1Q99MQ5 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col25a1Q99MQ5 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC16.88■□□□□ 0.29
Col25a1Q99MQ5 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col25a1Q99MQ5 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Col25a1Q99MQ5 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.88■□□□□ 0.29
Col25a1Q99MQ5 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col25a1Q99MQ5 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col25a1Q99MQ5 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Col25a1Q99MQ5 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.87■□□□□ 0.29
Col25a1Q99MQ5 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Col25a1Q99MQ5 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col25a1Q99MQ5 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.87■□□□□ 0.29
Col25a1Q99MQ5 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col25a1Q99MQ5 Gm5866-201ENSMUST00000177881 973 ntBASIC16.87■□□□□ 0.29
Col25a1Q99MQ5 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Col25a1Q99MQ5 Gm27437-201ENSMUST00000183429 107 ntBASIC16.87■□□□□ 0.29
Col25a1Q99MQ5 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.87■□□□□ 0.29
Col25a1Q99MQ5 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC16.87■□□□□ 0.29
Col25a1Q99MQ5 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.87■□□□□ 0.29
Col25a1Q99MQ5 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.87■□□□□ 0.29
Col25a1Q99MQ5 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col25a1Q99MQ5 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col25a1Q99MQ5 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col25a1Q99MQ5 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col25a1Q99MQ5 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Col25a1Q99MQ5 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col25a1Q99MQ5 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Col25a1Q99MQ5 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Col25a1Q99MQ5 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col25a1Q99MQ5 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col25a1Q99MQ5 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col25a1Q99MQ5 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Col25a1Q99MQ5 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col25a1Q99MQ5 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col25a1Q99MQ5 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col25a1Q99MQ5 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.86■□□□□ 0.29
Col25a1Q99MQ5 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Col25a1Q99MQ5 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col25a1Q99MQ5 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col25a1Q99MQ5 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col25a1Q99MQ5 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.86■□□□□ 0.29
Col25a1Q99MQ5 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col25a1Q99MQ5 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Col25a1Q99MQ5 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col25a1Q99MQ5 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col25a1Q99MQ5 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col25a1Q99MQ5 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col25a1Q99MQ5 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col25a1Q99MQ5 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Col25a1Q99MQ5 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col25a1Q99MQ5 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col25a1Q99MQ5 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Col25a1Q99MQ5 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
Col25a1Q99MQ5 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col25a1Q99MQ5 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Col25a1Q99MQ5 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col25a1Q99MQ5 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col25a1Q99MQ5 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col25a1Q99MQ5 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col25a1Q99MQ5 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Col25a1Q99MQ5 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.85■□□□□ 0.29
Col25a1Q99MQ5 Gm25745-201ENSMUST00000174945 133 ntBASIC16.85■□□□□ 0.29
Col25a1Q99MQ5 Gm38319-201ENSMUST00000194537 1266 ntBASIC16.85■□□□□ 0.29
Col25a1Q99MQ5 Gm5312-201ENSMUST00000203728 547 ntBASIC16.85■□□□□ 0.29
Col25a1Q99MQ5 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.85■□□□□ 0.29
Col25a1Q99MQ5 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.85■□□□□ 0.29
Col25a1Q99MQ5 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.85■□□□□ 0.29
Col25a1Q99MQ5 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col25a1Q99MQ5 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Col25a1Q99MQ5 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.85■□□□□ 0.29
Col25a1Q99MQ5 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col25a1Q99MQ5 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.85■□□□□ 0.29
Col25a1Q99MQ5 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col25a1Q99MQ5 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC16.85■□□□□ 0.29
Col25a1Q99MQ5 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Col25a1Q99MQ5 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col25a1Q99MQ5 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col25a1Q99MQ5 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col25a1Q99MQ5 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Col25a1Q99MQ5 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.84■□□□□ 0.29
Col25a1Q99MQ5 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.84■□□□□ 0.29
Col25a1Q99MQ5 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Col25a1Q99MQ5 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Col25a1Q99MQ5 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms