Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx6-1Q99MA9 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx6-1Q99MA9 Gm7222-201ENSMUST00000117512 906 ntBASIC15.28■□□□□ 0.04
Nkx6-1Q99MA9 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Nkx6-1Q99MA9 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx6-1Q99MA9 Gm8655-201ENSMUST00000221159 852 ntBASIC15.28■□□□□ 0.04
Nkx6-1Q99MA9 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.28■□□□□ 0.04
Nkx6-1Q99MA9 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx6-1Q99MA9 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC15.28■□□□□ 0.04
Nkx6-1Q99MA9 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx6-1Q99MA9 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx6-1Q99MA9 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.28■□□□□ 0.04
Nkx6-1Q99MA9 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx6-1Q99MA9 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Nkx6-1Q99MA9 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Nkx6-1Q99MA9 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Nkx6-1Q99MA9 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Nkx6-1Q99MA9 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx6-1Q99MA9 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx6-1Q99MA9 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx6-1Q99MA9 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx6-1Q99MA9 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx6-1Q99MA9 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx6-1Q99MA9 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Nkx6-1Q99MA9 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC15.27■□□□□ 0.04
Nkx6-1Q99MA9 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx6-1Q99MA9 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Nkx6-1Q99MA9 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.27■□□□□ 0.04
Nkx6-1Q99MA9 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx6-1Q99MA9 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC15.27■□□□□ 0.03
Nkx6-1Q99MA9 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx6-1Q99MA9 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx6-1Q99MA9 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx6-1Q99MA9 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx6-1Q99MA9 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx6-1Q99MA9 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx6-1Q99MA9 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.03
Nkx6-1Q99MA9 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx6-1Q99MA9 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx6-1Q99MA9 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nkx6-1Q99MA9 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Nkx6-1Q99MA9 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx6-1Q99MA9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx6-1Q99MA9 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.26■□□□□ 0.03
Nkx6-1Q99MA9 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx6-1Q99MA9 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Nkx6-1Q99MA9 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx6-1Q99MA9 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx6-1Q99MA9 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx6-1Q99MA9 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx6-1Q99MA9 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx6-1Q99MA9 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx6-1Q99MA9 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx6-1Q99MA9 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx6-1Q99MA9 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx6-1Q99MA9 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx6-1Q99MA9 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.26■□□□□ 0.03
Nkx6-1Q99MA9 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx6-1Q99MA9 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.26■□□□□ 0.03
Nkx6-1Q99MA9 Gm10175-201ENSMUST00000086013 645 ntBASIC15.26■□□□□ 0.03
Nkx6-1Q99MA9 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx6-1Q99MA9 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx6-1Q99MA9 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nkx6-1Q99MA9 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx6-1Q99MA9 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx6-1Q99MA9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx6-1Q99MA9 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx6-1Q99MA9 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
Nkx6-1Q99MA9 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx6-1Q99MA9 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.25■□□□□ 0.03
Nkx6-1Q99MA9 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx6-1Q99MA9 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx6-1Q99MA9 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx6-1Q99MA9 Mir3113-201ENSMUST00000175478 76 ntBASIC15.25■□□□□ 0.03
Nkx6-1Q99MA9 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC15.25■□□□□ 0.03
Nkx6-1Q99MA9 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx6-1Q99MA9 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC15.25■□□□□ 0.03
Nkx6-1Q99MA9 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx6-1Q99MA9 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx6-1Q99MA9 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx6-1Q99MA9 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.25■□□□□ 0.03
Nkx6-1Q99MA9 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Nkx6-1Q99MA9 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx6-1Q99MA9 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx6-1Q99MA9 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx6-1Q99MA9 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx6-1Q99MA9 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx6-1Q99MA9 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx6-1Q99MA9 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nkx6-1Q99MA9 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx6-1Q99MA9 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx6-1Q99MA9 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx6-1Q99MA9 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Nkx6-1Q99MA9 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.24■□□□□ 0.03
Nkx6-1Q99MA9 Gm4913-201ENSMUST00000117075 1290 ntBASIC15.24■□□□□ 0.03
Nkx6-1Q99MA9 Gm14057-201ENSMUST00000120631 482 ntBASIC15.24■□□□□ 0.03
Nkx6-1Q99MA9 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx6-1Q99MA9 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nkx6-1Q99MA9 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC15.24■□□□□ 0.03
Nkx6-1Q99MA9 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms