Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
Cdk5rap3Q99LM2 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdk5rap3Q99LM2 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cdk5rap3Q99LM2 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdk5rap3Q99LM2 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdk5rap3Q99LM2 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdk5rap3Q99LM2 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.93■□□□□ 0.3
Cdk5rap3Q99LM2 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdk5rap3Q99LM2 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdk5rap3Q99LM2 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Cdk5rap3Q99LM2 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdk5rap3Q99LM2 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdk5rap3Q99LM2 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cdk5rap3Q99LM2 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdk5rap3Q99LM2 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC16.93■□□□□ 0.3
Cdk5rap3Q99LM2 Gm11539-201ENSMUST00000119837 557 ntBASIC16.93■□□□□ 0.3
Cdk5rap3Q99LM2 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.93■□□□□ 0.3
Cdk5rap3Q99LM2 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.93■□□□□ 0.3
Cdk5rap3Q99LM2 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.93■□□□□ 0.3
Cdk5rap3Q99LM2 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdk5rap3Q99LM2 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdk5rap3Q99LM2 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdk5rap3Q99LM2 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdk5rap3Q99LM2 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Cdk5rap3Q99LM2 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdk5rap3Q99LM2 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdk5rap3Q99LM2 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdk5rap3Q99LM2 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk5rap3Q99LM2 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk5rap3Q99LM2 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk5rap3Q99LM2 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.92■□□□□ 0.3
Cdk5rap3Q99LM2 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Cdk5rap3Q99LM2 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.92■□□□□ 0.3
Cdk5rap3Q99LM2 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk5rap3Q99LM2 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Cdk5rap3Q99LM2 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.92■□□□□ 0.3
Cdk5rap3Q99LM2 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk5rap3Q99LM2 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk5rap3Q99LM2 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk5rap3Q99LM2 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Cdk5rap3Q99LM2 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk5rap3Q99LM2 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Cdk5rap3Q99LM2 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk5rap3Q99LM2 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk5rap3Q99LM2 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk5rap3Q99LM2 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk5rap3Q99LM2 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk5rap3Q99LM2 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk5rap3Q99LM2 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.92■□□□□ 0.3
Cdk5rap3Q99LM2 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.92■□□□□ 0.3
Cdk5rap3Q99LM2 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk5rap3Q99LM2 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdk5rap3Q99LM2 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Cdk5rap3Q99LM2 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Cdk5rap3Q99LM2 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdk5rap3Q99LM2 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Cdk5rap3Q99LM2 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.91■□□□□ 0.3
Cdk5rap3Q99LM2 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Cdk5rap3Q99LM2 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.91■□□□□ 0.3
Cdk5rap3Q99LM2 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.91■□□□□ 0.3
Cdk5rap3Q99LM2 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Cdk5rap3Q99LM2 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.91■□□□□ 0.3
Cdk5rap3Q99LM2 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.91■□□□□ 0.3
Cdk5rap3Q99LM2 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.91■□□□□ 0.3
Cdk5rap3Q99LM2 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.91■□□□□ 0.3
Cdk5rap3Q99LM2 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
Cdk5rap3Q99LM2 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cdk5rap3Q99LM2 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Cdk5rap3Q99LM2 Gm10812-201ENSMUST00000099864 546 ntBASIC16.91■□□□□ 0.3
Cdk5rap3Q99LM2 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdk5rap3Q99LM2 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cdk5rap3Q99LM2 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cdk5rap3Q99LM2 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdk5rap3Q99LM2 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdk5rap3Q99LM2 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.91■□□□□ 0.3
Cdk5rap3Q99LM2 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdk5rap3Q99LM2 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdk5rap3Q99LM2 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdk5rap3Q99LM2 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdk5rap3Q99LM2 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cdk5rap3Q99LM2 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdk5rap3Q99LM2 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdk5rap3Q99LM2 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdk5rap3Q99LM2 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdk5rap3Q99LM2 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdk5rap3Q99LM2 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdk5rap3Q99LM2 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Cdk5rap3Q99LM2 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Cdk5rap3Q99LM2 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.9■□□□□ 0.3
Cdk5rap3Q99LM2 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdk5rap3Q99LM2 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdk5rap3Q99LM2 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.9■□□□□ 0.3
Cdk5rap3Q99LM2 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.9■□□□□ 0.3
Cdk5rap3Q99LM2 Gm7370-201ENSMUST00000219471 767 ntBASIC16.9■□□□□ 0.3
Cdk5rap3Q99LM2 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cdk5rap3Q99LM2 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdk5rap3Q99LM2 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.9■□□□□ 0.3
Cdk5rap3Q99LM2 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdk5rap3Q99LM2 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cdk5rap3Q99LM2 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms