Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdk9Q99J95 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdk9Q99J95 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdk9Q99J95 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdk9Q99J95 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdk9Q99J95 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdk9Q99J95 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Cdk9Q99J95 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Cdk9Q99J95 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdk9Q99J95 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdk9Q99J95 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Cdk9Q99J95 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdk9Q99J95 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdk9Q99J95 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdk9Q99J95 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdk9Q99J95 Ccdc166-201ENSMUST00000182172 2584 ntBASIC16.49■□□□□ 0.23
Cdk9Q99J95 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Cdk9Q99J95 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cdk9Q99J95 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
Cdk9Q99J95 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Cdk9Q99J95 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Cdk9Q99J95 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Cdk9Q99J95 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Cdk9Q99J95 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Cdk9Q99J95 Gm27275-201ENSMUST00000184318 272 ntBASIC16.49■□□□□ 0.23
Cdk9Q99J95 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC16.49■□□□□ 0.23
Cdk9Q99J95 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.49■□□□□ 0.23
Cdk9Q99J95 AC163280.1-201ENSMUST00000228194 1100 ntBASIC16.49■□□□□ 0.23
Cdk9Q99J95 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdk9Q99J95 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Cdk9Q99J95 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdk9Q99J95 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
Cdk9Q99J95 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdk9Q99J95 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.49■□□□□ 0.23
Cdk9Q99J95 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdk9Q99J95 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC16.49■□□□□ 0.23
Cdk9Q99J95 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdk9Q99J95 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdk9Q99J95 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdk9Q99J95 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdk9Q99J95 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdk9Q99J95 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Cdk9Q99J95 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdk9Q99J95 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdk9Q99J95 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.48■□□□□ 0.23
Cdk9Q99J95 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Cdk9Q99J95 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdk9Q99J95 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdk9Q99J95 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.48■□□□□ 0.23
Cdk9Q99J95 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Cdk9Q99J95 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdk9Q99J95 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdk9Q99J95 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdk9Q99J95 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdk9Q99J95 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdk9Q99J95 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdk9Q99J95 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdk9Q99J95 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdk9Q99J95 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdk9Q99J95 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdk9Q99J95 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Cdk9Q99J95 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk9Q99J95 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk9Q99J95 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.47■□□□□ 0.23
Cdk9Q99J95 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk9Q99J95 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk9Q99J95 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk9Q99J95 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk9Q99J95 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk9Q99J95 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk9Q99J95 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Cdk9Q99J95 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk9Q99J95 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk9Q99J95 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk9Q99J95 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk9Q99J95 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk9Q99J95 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Cdk9Q99J95 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk9Q99J95 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk9Q99J95 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
Cdk9Q99J95 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk9Q99J95 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Cdk9Q99J95 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk9Q99J95 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk9Q99J95 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk9Q99J95 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk9Q99J95 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk9Q99J95 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC16.47■□□□□ 0.23
Cdk9Q99J95 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk9Q99J95 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Cdk9Q99J95 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk9Q99J95 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Cdk9Q99J95 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Cdk9Q99J95 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Cdk9Q99J95 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Cdk9Q99J95 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Cdk9Q99J95 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdk9Q99J95 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdk9Q99J95 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Cdk9Q99J95 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms