Protein–RNA interactions for Protein: Q99J79

Ddb2, DNA damage-binding protein 2, mousemouse

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb2Q99J79 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.45□□□□□ -0.1
Ddb2Q99J79 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.45□□□□□ -0.1
Ddb2Q99J79 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
Ddb2Q99J79 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddb2Q99J79 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddb2Q99J79 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.45□□□□□ -0.1
Ddb2Q99J79 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ddb2Q99J79 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddb2Q99J79 Haglr-201ENSMUST00000100000 2085 ntBASIC14.45□□□□□ -0.1
Ddb2Q99J79 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ddb2Q99J79 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddb2Q99J79 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Ddb2Q99J79 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Ddb2Q99J79 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddb2Q99J79 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.44□□□□□ -0.1
Ddb2Q99J79 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddb2Q99J79 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddb2Q99J79 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ddb2Q99J79 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Ddb2Q99J79 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ddb2Q99J79 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Ddb2Q99J79 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.44□□□□□ -0.1
Ddb2Q99J79 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddb2Q99J79 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.44□□□□□ -0.1
Ddb2Q99J79 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
Ddb2Q99J79 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.44□□□□□ -0.1
Ddb2Q99J79 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddb2Q99J79 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddb2Q99J79 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddb2Q99J79 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddb2Q99J79 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ddb2Q99J79 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ddb2Q99J79 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ddb2Q99J79 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Ddb2Q99J79 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddb2Q99J79 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ddb2Q99J79 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ddb2Q99J79 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddb2Q99J79 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddb2Q99J79 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ddb2Q99J79 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ddb2Q99J79 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
Ddb2Q99J79 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Ddb2Q99J79 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Ddb2Q99J79 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ddb2Q99J79 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ddb2Q99J79 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ddb2Q99J79 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ddb2Q99J79 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ddb2Q99J79 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ddb2Q99J79 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Ddb2Q99J79 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ddb2Q99J79 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.43□□□□□ -0.1
Ddb2Q99J79 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ddb2Q99J79 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ddb2Q99J79 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Ddb2Q99J79 Gm25016-201ENSMUST00000158399 131 ntBASIC14.43□□□□□ -0.1
Ddb2Q99J79 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Ddb2Q99J79 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.43□□□□□ -0.1
Ddb2Q99J79 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ddb2Q99J79 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ddb2Q99J79 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.43□□□□□ -0.1
Ddb2Q99J79 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ddb2Q99J79 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ddb2Q99J79 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Ddb2Q99J79 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ddb2Q99J79 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ddb2Q99J79 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ddb2Q99J79 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ddb2Q99J79 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ddb2Q99J79 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ddb2Q99J79 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ddb2Q99J79 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.43□□□□□ -0.1
Ddb2Q99J79 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ddb2Q99J79 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ddb2Q99J79 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddb2Q99J79 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddb2Q99J79 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddb2Q99J79 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Ddb2Q99J79 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddb2Q99J79 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ddb2Q99J79 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddb2Q99J79 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.42□□□□□ -0.1
Ddb2Q99J79 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ddb2Q99J79 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ddb2Q99J79 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ddb2Q99J79 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddb2Q99J79 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddb2Q99J79 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddb2Q99J79 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ddb2Q99J79 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddb2Q99J79 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.42□□□□□ -0.1
Ddb2Q99J79 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ddb2Q99J79 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddb2Q99J79 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.42□□□□□ -0.1
Ddb2Q99J79 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ddb2Q99J79 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ddb2Q99J79 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ddb2Q99J79 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ddb2Q99J79 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms