Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Gm1401-201ENSMUST00000122048 772 ntBASIC18.78■□□□□ 0.6
Smc1bQ920F6 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smc1bQ920F6 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC18.78■□□□□ 0.6
Smc1bQ920F6 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Smc1bQ920F6 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC18.78■□□□□ 0.6
Smc1bQ920F6 AC138767.1-201ENSMUST00000222661 415 ntBASIC18.78■□□□□ 0.6
Smc1bQ920F6 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.78■□□□□ 0.6
Smc1bQ920F6 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smc1bQ920F6 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Smc1bQ920F6 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smc1bQ920F6 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.78■□□□□ 0.6
Smc1bQ920F6 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smc1bQ920F6 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smc1bQ920F6 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.78■□□□□ 0.6
Smc1bQ920F6 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smc1bQ920F6 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Smc1bQ920F6 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Smc1bQ920F6 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.78■□□□□ 0.6
Smc1bQ920F6 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Smc1bQ920F6 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Smc1bQ920F6 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smc1bQ920F6 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smc1bQ920F6 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smc1bQ920F6 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Smc1bQ920F6 Gm12644-201ENSMUST00000119935 606 ntBASIC18.77■□□□□ 0.6
Smc1bQ920F6 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC18.77■□□□□ 0.6
Smc1bQ920F6 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Smc1bQ920F6 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Smc1bQ920F6 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smc1bQ920F6 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smc1bQ920F6 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smc1bQ920F6 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Smc1bQ920F6 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC18.77■□□□□ 0.6
Smc1bQ920F6 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Smc1bQ920F6 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Smc1bQ920F6 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Smc1bQ920F6 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smc1bQ920F6 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Smc1bQ920F6 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smc1bQ920F6 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Smc1bQ920F6 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smc1bQ920F6 Gm1818-201ENSMUST00000169406 1184 ntBASIC18.76■□□□□ 0.59
Smc1bQ920F6 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Smc1bQ920F6 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.76■□□□□ 0.59
Smc1bQ920F6 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smc1bQ920F6 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smc1bQ920F6 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Smc1bQ920F6 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smc1bQ920F6 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smc1bQ920F6 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smc1bQ920F6 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smc1bQ920F6 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Smc1bQ920F6 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Smc1bQ920F6 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smc1bQ920F6 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smc1bQ920F6 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Smc1bQ920F6 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smc1bQ920F6 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Smc1bQ920F6 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smc1bQ920F6 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smc1bQ920F6 Gm11336-201ENSMUST00000118168 334 ntBASIC18.75■□□□□ 0.59
Smc1bQ920F6 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smc1bQ920F6 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Smc1bQ920F6 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Smc1bQ920F6 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Smc1bQ920F6 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smc1bQ920F6 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Smc1bQ920F6 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smc1bQ920F6 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.75■□□□□ 0.59
Smc1bQ920F6 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC18.75■□□□□ 0.59
Smc1bQ920F6 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Smc1bQ920F6 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Smc1bQ920F6 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc1bQ920F6 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc1bQ920F6 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc1bQ920F6 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Smc1bQ920F6 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc1bQ920F6 Gm8000-201ENSMUST00000188378 592 ntBASIC18.74■□□□□ 0.59
Smc1bQ920F6 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Smc1bQ920F6 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC18.74■□□□□ 0.59
Smc1bQ920F6 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC18.74■□□□□ 0.59
Smc1bQ920F6 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc1bQ920F6 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc1bQ920F6 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc1bQ920F6 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Smc1bQ920F6 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc1bQ920F6 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc1bQ920F6 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.74■□□□□ 0.59
Smc1bQ920F6 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc1bQ920F6 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Smc1bQ920F6 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Smc1bQ920F6 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc1bQ920F6 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC18.73■□□□□ 0.59
Smc1bQ920F6 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.73■□□□□ 0.59
Smc1bQ920F6 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc1bQ920F6 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc1bQ920F6 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.73■□□□□ 0.59
Smc1bQ920F6 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc1bQ920F6 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Smc1bQ920F6 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms