Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.92■□□□□ 0.14
Pcdha8Q91Y12 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha8Q91Y12 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Pcdha8Q91Y12 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha8Q91Y12 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha8Q91Y12 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha8Q91Y12 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha8Q91Y12 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha8Q91Y12 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.92■□□□□ 0.14
Pcdha8Q91Y12 Gm26039-201ENSMUST00000158152 144 ntBASIC15.92■□□□□ 0.14
Pcdha8Q91Y12 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC15.92■□□□□ 0.14
Pcdha8Q91Y12 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha8Q91Y12 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha8Q91Y12 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha8Q91Y12 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.92■□□□□ 0.14
Pcdha8Q91Y12 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha8Q91Y12 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha8Q91Y12 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.92■□□□□ 0.14
Pcdha8Q91Y12 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Pcdha8Q91Y12 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.92■□□□□ 0.14
Pcdha8Q91Y12 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha8Q91Y12 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha8Q91Y12 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Pcdha8Q91Y12 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha8Q91Y12 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha8Q91Y12 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha8Q91Y12 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha8Q91Y12 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.91■□□□□ 0.14
Pcdha8Q91Y12 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha8Q91Y12 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Pcdha8Q91Y12 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha8Q91Y12 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha8Q91Y12 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha8Q91Y12 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha8Q91Y12 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha8Q91Y12 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC15.91■□□□□ 0.14
Pcdha8Q91Y12 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha8Q91Y12 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha8Q91Y12 Gm27389-201ENSMUST00000183622 195 ntBASIC15.91■□□□□ 0.14
Pcdha8Q91Y12 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC15.91■□□□□ 0.14
Pcdha8Q91Y12 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.91■□□□□ 0.14
Pcdha8Q91Y12 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha8Q91Y12 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha8Q91Y12 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha8Q91Y12 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Pcdha8Q91Y12 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha8Q91Y12 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha8Q91Y12 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha8Q91Y12 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha8Q91Y12 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Pcdha8Q91Y12 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha8Q91Y12 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
Pcdha8Q91Y12 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha8Q91Y12 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha8Q91Y12 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.9■□□□□ 0.14
Pcdha8Q91Y12 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha8Q91Y12 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha8Q91Y12 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Pcdha8Q91Y12 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC15.9■□□□□ 0.14
Pcdha8Q91Y12 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Pcdha8Q91Y12 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
Pcdha8Q91Y12 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha8Q91Y12 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha8Q91Y12 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC15.9■□□□□ 0.14
Pcdha8Q91Y12 Gm44450-201ENSMUST00000199528 114 ntBASIC15.9■□□□□ 0.14
Pcdha8Q91Y12 Gm18101-201ENSMUST00000215769 548 ntBASIC15.9■□□□□ 0.14
Pcdha8Q91Y12 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC15.9■□□□□ 0.14
Pcdha8Q91Y12 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha8Q91Y12 Gm9987-201ENSMUST00000069768 567 ntBASIC15.9■□□□□ 0.14
Pcdha8Q91Y12 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha8Q91Y12 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha8Q91Y12 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha8Q91Y12 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha8Q91Y12 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha8Q91Y12 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha8Q91Y12 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Pcdha8Q91Y12 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha8Q91Y12 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha8Q91Y12 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Pcdha8Q91Y12 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha8Q91Y12 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha8Q91Y12 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Pcdha8Q91Y12 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha8Q91Y12 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha8Q91Y12 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha8Q91Y12 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha8Q91Y12 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha8Q91Y12 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha8Q91Y12 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Pcdha8Q91Y12 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.89■□□□□ 0.13
Pcdha8Q91Y12 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha8Q91Y12 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.89■□□□□ 0.13
Pcdha8Q91Y12 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.89■□□□□ 0.13
Pcdha8Q91Y12 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha8Q91Y12 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha8Q91Y12 Gm22697-201ENSMUST00000175194 63 ntBASIC15.89■□□□□ 0.13
Pcdha8Q91Y12 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.89■□□□□ 0.13
Pcdha8Q91Y12 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Pcdha8Q91Y12 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Pcdha8Q91Y12 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms