Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb18Q91Y02 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Pcdhb18Q91Y02 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Pcdhb18Q91Y02 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Pcdhb18Q91Y02 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb18Q91Y02 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb18Q91Y02 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb18Q91Y02 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb18Q91Y02 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb18Q91Y02 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb18Q91Y02 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb18Q91Y02 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb18Q91Y02 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb18Q91Y02 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.04■□□□□ 0.32
Pcdhb18Q91Y02 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.04■□□□□ 0.32
Pcdhb18Q91Y02 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Pcdhb18Q91Y02 Gm2651-201ENSMUST00000203560 838 ntBASIC17.04■□□□□ 0.32
Pcdhb18Q91Y02 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.04■□□□□ 0.32
Pcdhb18Q91Y02 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.04■□□□□ 0.32
Pcdhb18Q91Y02 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Pcdhb18Q91Y02 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.04■□□□□ 0.32
Pcdhb18Q91Y02 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb18Q91Y02 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb18Q91Y02 Gm5867-201ENSMUST00000063197 592 ntBASIC17.04■□□□□ 0.32
Pcdhb18Q91Y02 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb18Q91Y02 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb18Q91Y02 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.04■□□□□ 0.32
Pcdhb18Q91Y02 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb18Q91Y02 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb18Q91Y02 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Pcdhb18Q91Y02 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb18Q91Y02 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb18Q91Y02 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Pcdhb18Q91Y02 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb18Q91Y02 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Pcdhb18Q91Y02 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Pcdhb18Q91Y02 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Pcdhb18Q91Y02 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb18Q91Y02 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb18Q91Y02 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb18Q91Y02 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb18Q91Y02 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Pcdhb18Q91Y02 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb18Q91Y02 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb18Q91Y02 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb18Q91Y02 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb18Q91Y02 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb18Q91Y02 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb18Q91Y02 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb18Q91Y02 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.03■□□□□ 0.32
Pcdhb18Q91Y02 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb18Q91Y02 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb18Q91Y02 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb18Q91Y02 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb18Q91Y02 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
Pcdhb18Q91Y02 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.03■□□□□ 0.32
Pcdhb18Q91Y02 Gm18206-201ENSMUST00000207027 926 ntBASIC17.03■□□□□ 0.32
Pcdhb18Q91Y02 Gm6296-201ENSMUST00000222599 943 ntBASIC17.03■□□□□ 0.32
Pcdhb18Q91Y02 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb18Q91Y02 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb18Q91Y02 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Pcdhb18Q91Y02 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb18Q91Y02 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb18Q91Y02 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb18Q91Y02 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb18Q91Y02 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.03■□□□□ 0.32
Pcdhb18Q91Y02 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Pcdhb18Q91Y02 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
Pcdhb18Q91Y02 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb18Q91Y02 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb18Q91Y02 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.02■□□□□ 0.32
Pcdhb18Q91Y02 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb18Q91Y02 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb18Q91Y02 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb18Q91Y02 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb18Q91Y02 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb18Q91Y02 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb18Q91Y02 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb18Q91Y02 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.02■□□□□ 0.32
Pcdhb18Q91Y02 Gm7862-201ENSMUST00000121461 292 ntBASIC17.02■□□□□ 0.32
Pcdhb18Q91Y02 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb18Q91Y02 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb18Q91Y02 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.02■□□□□ 0.32
Pcdhb18Q91Y02 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb18Q91Y02 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Pcdhb18Q91Y02 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.02■□□□□ 0.31
Pcdhb18Q91Y02 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb18Q91Y02 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb18Q91Y02 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb18Q91Y02 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb18Q91Y02 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb18Q91Y02 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Pcdhb18Q91Y02 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb18Q91Y02 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb18Q91Y02 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Pcdhb18Q91Y02 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb18Q91Y02 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb18Q91Y02 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb18Q91Y02 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Pcdhb18Q91Y02 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms