Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb5Q91XZ5 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Pcdhb5Q91XZ5 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb5Q91XZ5 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdhb5Q91XZ5 Gm37811-201ENSMUST00000192416 2601 ntBASIC19.21■□□□□ 0.67
Pcdhb5Q91XZ5 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb5Q91XZ5 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb5Q91XZ5 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC19.21■□□□□ 0.67
Pcdhb5Q91XZ5 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb5Q91XZ5 Gm8097-201ENSMUST00000117903 829 ntBASIC19.21■□□□□ 0.67
Pcdhb5Q91XZ5 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC19.21■□□□□ 0.67
Pcdhb5Q91XZ5 Gm9172-201ENSMUST00000212092 954 ntBASIC19.21■□□□□ 0.67
Pcdhb5Q91XZ5 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Pcdhb5Q91XZ5 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb5Q91XZ5 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb5Q91XZ5 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb5Q91XZ5 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb5Q91XZ5 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb5Q91XZ5 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb5Q91XZ5 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdhb5Q91XZ5 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb5Q91XZ5 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb5Q91XZ5 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb5Q91XZ5 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb5Q91XZ5 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC19.2■□□□□ 0.66
Pcdhb5Q91XZ5 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb5Q91XZ5 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Pcdhb5Q91XZ5 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Pcdhb5Q91XZ5 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb5Q91XZ5 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdhb5Q91XZ5 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Pcdhb5Q91XZ5 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb5Q91XZ5 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb5Q91XZ5 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb5Q91XZ5 Gm25406-201ENSMUST00000157599 105 ntBASIC19.19■□□□□ 0.66
Pcdhb5Q91XZ5 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC19.19■□□□□ 0.66
Pcdhb5Q91XZ5 Gm37935-201ENSMUST00000192012 982 ntBASIC19.19■□□□□ 0.66
Pcdhb5Q91XZ5 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb5Q91XZ5 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Pcdhb5Q91XZ5 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Pcdhb5Q91XZ5 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Pcdhb5Q91XZ5 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb5Q91XZ5 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Pcdhb5Q91XZ5 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb5Q91XZ5 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb5Q91XZ5 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb5Q91XZ5 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
Pcdhb5Q91XZ5 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb5Q91XZ5 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdhb5Q91XZ5 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb5Q91XZ5 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb5Q91XZ5 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb5Q91XZ5 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.18■□□□□ 0.66
Pcdhb5Q91XZ5 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb5Q91XZ5 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb5Q91XZ5 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb5Q91XZ5 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb5Q91XZ5 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb5Q91XZ5 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb5Q91XZ5 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb5Q91XZ5 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb5Q91XZ5 Gm6089-201ENSMUST00000197666 938 ntBASIC19.18■□□□□ 0.66
Pcdhb5Q91XZ5 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb5Q91XZ5 AC154757.1-201ENSMUST00000228289 336 ntBASIC19.18■□□□□ 0.66
Pcdhb5Q91XZ5 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Pcdhb5Q91XZ5 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb5Q91XZ5 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb5Q91XZ5 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Pcdhb5Q91XZ5 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.18■□□□□ 0.66
Pcdhb5Q91XZ5 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb5Q91XZ5 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb5Q91XZ5 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdhb5Q91XZ5 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Pcdhb5Q91XZ5 AC132265.1-201ENSMUST00000219233 1665 ntBASIC19.17■□□□□ 0.66
Pcdhb5Q91XZ5 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb5Q91XZ5 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb5Q91XZ5 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.17■□□□□ 0.66
Pcdhb5Q91XZ5 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb5Q91XZ5 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb5Q91XZ5 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Pcdhb5Q91XZ5 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Pcdhb5Q91XZ5 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb5Q91XZ5 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC19.17■□□□□ 0.66
Pcdhb5Q91XZ5 Gm11780-201ENSMUST00000136880 516 ntBASIC19.17■□□□□ 0.66
Pcdhb5Q91XZ5 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC19.17■□□□□ 0.66
Pcdhb5Q91XZ5 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb5Q91XZ5 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC19.17■□□□□ 0.66
Pcdhb5Q91XZ5 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC19.17■□□□□ 0.66
Pcdhb5Q91XZ5 Gm8000-201ENSMUST00000188378 592 ntBASIC19.17■□□□□ 0.66
Pcdhb5Q91XZ5 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
Pcdhb5Q91XZ5 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC19.17■□□□□ 0.66
Pcdhb5Q91XZ5 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb5Q91XZ5 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdhb5Q91XZ5 Gm15590-201ENSMUST00000078419 552 ntBASIC19.17■□□□□ 0.66
Pcdhb5Q91XZ5 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
Pcdhb5Q91XZ5 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC19.17■□□□□ 0.66
Pcdhb5Q91XZ5 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Pcdhb5Q91XZ5 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb5Q91XZ5 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Pcdhb5Q91XZ5 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms