Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga3Q91XY5 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga3Q91XY5 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga3Q91XY5 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga3Q91XY5 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga3Q91XY5 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga3Q91XY5 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga3Q91XY5 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.56□□□□□ -0.08
Pcdhga3Q91XY5 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga3Q91XY5 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga3Q91XY5 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC14.56□□□□□ -0.08
Pcdhga3Q91XY5 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga3Q91XY5 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga3Q91XY5 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga3Q91XY5 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.56□□□□□ -0.08
Pcdhga3Q91XY5 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga3Q91XY5 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.56□□□□□ -0.08
Pcdhga3Q91XY5 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.56□□□□□ -0.08
Pcdhga3Q91XY5 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Pcdhga3Q91XY5 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga3Q91XY5 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga3Q91XY5 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga3Q91XY5 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga3Q91XY5 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga3Q91XY5 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga3Q91XY5 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.55□□□□□ -0.08
Pcdhga3Q91XY5 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.55□□□□□ -0.08
Pcdhga3Q91XY5 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga3Q91XY5 Spsb2-203ENSMUST00000112473 1322 ntBASIC14.55□□□□□ -0.08
Pcdhga3Q91XY5 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Pcdhga3Q91XY5 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga3Q91XY5 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga3Q91XY5 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga3Q91XY5 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC14.55□□□□□ -0.08
Pcdhga3Q91XY5 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga3Q91XY5 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga3Q91XY5 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga3Q91XY5 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga3Q91XY5 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Pcdhga3Q91XY5 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Pcdhga3Q91XY5 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga3Q91XY5 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga3Q91XY5 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga3Q91XY5 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga3Q91XY5 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga3Q91XY5 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga3Q91XY5 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Pcdhga3Q91XY5 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga3Q91XY5 Gm7889-201ENSMUST00000185591 958 ntBASIC14.54□□□□□ -0.08
Pcdhga3Q91XY5 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC14.54□□□□□ -0.08
Pcdhga3Q91XY5 Gm18959-201ENSMUST00000208954 655 ntBASIC14.54□□□□□ -0.08
Pcdhga3Q91XY5 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga3Q91XY5 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga3Q91XY5 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga3Q91XY5 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga3Q91XY5 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga3Q91XY5 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga3Q91XY5 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga3Q91XY5 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Pcdhga3Q91XY5 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Pcdhga3Q91XY5 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Pcdhga3Q91XY5 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga3Q91XY5 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga3Q91XY5 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Pcdhga3Q91XY5 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Pcdhga3Q91XY5 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.54□□□□□ -0.08
Pcdhga3Q91XY5 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Pcdhga3Q91XY5 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhga3Q91XY5 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhga3Q91XY5 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhga3Q91XY5 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhga3Q91XY5 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhga3Q91XY5 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhga3Q91XY5 Wnt10b-204ENSMUST00000226655 1807 ntBASIC14.53□□□□□ -0.08
Pcdhga3Q91XY5 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhga3Q91XY5 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhga3Q91XY5 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhga3Q91XY5 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhga3Q91XY5 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhga3Q91XY5 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhga3Q91XY5 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhga3Q91XY5 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhga3Q91XY5 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC14.53□□□□□ -0.08
Pcdhga3Q91XY5 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC14.53□□□□□ -0.08
Pcdhga3Q91XY5 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC14.53□□□□□ -0.08
Pcdhga3Q91XY5 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.53□□□□□ -0.08
Pcdhga3Q91XY5 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.53□□□□□ -0.08
Pcdhga3Q91XY5 Mir5130-201ENSMUST00000175160 84 ntBASIC14.53□□□□□ -0.08
Pcdhga3Q91XY5 Gm45058-201ENSMUST00000205810 766 ntBASIC14.53□□□□□ -0.08
Pcdhga3Q91XY5 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhga3Q91XY5 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhga3Q91XY5 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhga3Q91XY5 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhga3Q91XY5 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Pcdhga3Q91XY5 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhga3Q91XY5 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhga3Q91XY5 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Pcdhga3Q91XY5 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.53□□□□□ -0.08
Pcdhga3Q91XY5 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Pcdhga3Q91XY5 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms