Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhga6Q91XY2 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhga6Q91XY2 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pcdhga6Q91XY2 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga6Q91XY2 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.21■□□□□ 0.19
Pcdhga6Q91XY2 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga6Q91XY2 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga6Q91XY2 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.21■□□□□ 0.19
Pcdhga6Q91XY2 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga6Q91XY2 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga6Q91XY2 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga6Q91XY2 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga6Q91XY2 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.21■□□□□ 0.19
Pcdhga6Q91XY2 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga6Q91XY2 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga6Q91XY2 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Pcdhga6Q91XY2 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.21■□□□□ 0.19
Pcdhga6Q91XY2 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.21■□□□□ 0.19
Pcdhga6Q91XY2 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.21■□□□□ 0.19
Pcdhga6Q91XY2 Gm43575-201ENSMUST00000196420 516 ntBASIC16.21■□□□□ 0.19
Pcdhga6Q91XY2 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga6Q91XY2 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga6Q91XY2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga6Q91XY2 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.21■□□□□ 0.19
Pcdhga6Q91XY2 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Pcdhga6Q91XY2 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga6Q91XY2 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga6Q91XY2 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.21■□□□□ 0.19
Pcdhga6Q91XY2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga6Q91XY2 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pcdhga6Q91XY2 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdhga6Q91XY2 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdhga6Q91XY2 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdhga6Q91XY2 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdhga6Q91XY2 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.21■□□□□ 0.18
Pcdhga6Q91XY2 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pcdhga6Q91XY2 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Pcdhga6Q91XY2 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhga6Q91XY2 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhga6Q91XY2 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhga6Q91XY2 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhga6Q91XY2 Gm11779-201ENSMUST00000118541 368 ntBASIC16.2■□□□□ 0.18
Pcdhga6Q91XY2 Gm15467-201ENSMUST00000120582 445 ntBASIC16.2■□□□□ 0.18
Pcdhga6Q91XY2 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhga6Q91XY2 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.2■□□□□ 0.18
Pcdhga6Q91XY2 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhga6Q91XY2 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Pcdhga6Q91XY2 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhga6Q91XY2 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhga6Q91XY2 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Pcdhga6Q91XY2 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhga6Q91XY2 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhga6Q91XY2 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Pcdhga6Q91XY2 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhga6Q91XY2 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhga6Q91XY2 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhga6Q91XY2 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhga6Q91XY2 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhga6Q91XY2 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Pcdhga6Q91XY2 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pcdhga6Q91XY2 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga6Q91XY2 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga6Q91XY2 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga6Q91XY2 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga6Q91XY2 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga6Q91XY2 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga6Q91XY2 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga6Q91XY2 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga6Q91XY2 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga6Q91XY2 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga6Q91XY2 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Pcdhga6Q91XY2 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Pcdhga6Q91XY2 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Pcdhga6Q91XY2 Gm13312-201ENSMUST00000119631 718 ntBASIC16.19■□□□□ 0.18
Pcdhga6Q91XY2 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.19■□□□□ 0.18
Pcdhga6Q91XY2 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.19■□□□□ 0.18
Pcdhga6Q91XY2 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
Pcdhga6Q91XY2 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Pcdhga6Q91XY2 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.19■□□□□ 0.18
Pcdhga6Q91XY2 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga6Q91XY2 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga6Q91XY2 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga6Q91XY2 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga6Q91XY2 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga6Q91XY2 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga6Q91XY2 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga6Q91XY2 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga6Q91XY2 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga6Q91XY2 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Pcdhga6Q91XY2 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga6Q91XY2 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga6Q91XY2 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga6Q91XY2 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Pcdhga6Q91XY2 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC16.19■□□□□ 0.18
Pcdhga6Q91XY2 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga6Q91XY2 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga6Q91XY2 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pcdhga6Q91XY2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhga6Q91XY2 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pcdhga6Q91XY2 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms