Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgb4Q91XX6 Gm26039-201ENSMUST00000158152 144 ntBASIC17.31■□□□□ 0.36
Pcdhgb4Q91XX6 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgb4Q91XX6 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Pcdhgb4Q91XX6 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Pcdhgb4Q91XX6 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgb4Q91XX6 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Pcdhgb4Q91XX6 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgb4Q91XX6 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgb4Q91XX6 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgb4Q91XX6 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Pcdhgb4Q91XX6 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgb4Q91XX6 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgb4Q91XX6 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Pcdhgb4Q91XX6 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgb4Q91XX6 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgb4Q91XX6 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgb4Q91XX6 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.31■□□□□ 0.36
Pcdhgb4Q91XX6 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhgb4Q91XX6 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgb4Q91XX6 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgb4Q91XX6 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Pcdhgb4Q91XX6 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgb4Q91XX6 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgb4Q91XX6 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgb4Q91XX6 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgb4Q91XX6 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.3■□□□□ 0.36
Pcdhgb4Q91XX6 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC17.3■□□□□ 0.36
Pcdhgb4Q91XX6 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgb4Q91XX6 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgb4Q91XX6 Mir1668-201ENSMUST00000184114 107 ntBASIC17.3■□□□□ 0.36
Pcdhgb4Q91XX6 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC17.3■□□□□ 0.36
Pcdhgb4Q91XX6 Gm37102-201ENSMUST00000195740 1105 ntBASIC17.3■□□□□ 0.36
Pcdhgb4Q91XX6 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgb4Q91XX6 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgb4Q91XX6 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgb4Q91XX6 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgb4Q91XX6 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Pcdhgb4Q91XX6 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgb4Q91XX6 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgb4Q91XX6 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgb4Q91XX6 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgb4Q91XX6 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgb4Q91XX6 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgb4Q91XX6 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgb4Q91XX6 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgb4Q91XX6 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.3■□□□□ 0.36
Pcdhgb4Q91XX6 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Pcdhgb4Q91XX6 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgb4Q91XX6 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.29■□□□□ 0.36
Pcdhgb4Q91XX6 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgb4Q91XX6 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgb4Q91XX6 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgb4Q91XX6 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgb4Q91XX6 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgb4Q91XX6 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.29■□□□□ 0.36
Pcdhgb4Q91XX6 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgb4Q91XX6 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgb4Q91XX6 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgb4Q91XX6 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Pcdhgb4Q91XX6 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Pcdhgb4Q91XX6 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgb4Q91XX6 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
Pcdhgb4Q91XX6 Gm11361-201ENSMUST00000223428 607 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Pcdhgb4Q91XX6 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgb4Q91XX6 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgb4Q91XX6 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgb4Q91XX6 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgb4Q91XX6 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.29■□□□□ 0.36
Pcdhgb4Q91XX6 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgb4Q91XX6 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Pcdhgb4Q91XX6 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Pcdhgb4Q91XX6 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgb4Q91XX6 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgb4Q91XX6 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgb4Q91XX6 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgb4Q91XX6 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgb4Q91XX6 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.28■□□□□ 0.36
Pcdhgb4Q91XX6 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgb4Q91XX6 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgb4Q91XX6 Gm21156-201ENSMUST00000189693 869 ntBASIC17.28■□□□□ 0.36
Pcdhgb4Q91XX6 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.28■□□□□ 0.36
Pcdhgb4Q91XX6 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgb4Q91XX6 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.28■□□□□ 0.36
Pcdhgb4Q91XX6 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgb4Q91XX6 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgb4Q91XX6 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC17.28■□□□□ 0.36
Pcdhgb4Q91XX6 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgb4Q91XX6 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgb4Q91XX6 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Pcdhgb4Q91XX6 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Pcdhgb4Q91XX6 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgb4Q91XX6 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Pcdhgb4Q91XX6 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.28■□□□□ 0.36
Pcdhgb4Q91XX6 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Pcdhgb4Q91XX6 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Pcdhgb4Q91XX6 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.27■□□□□ 0.36
Pcdhgb4Q91XX6 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC17.27■□□□□ 0.36
Pcdhgb4Q91XX6 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Pcdhgb4Q91XX6 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms