Protein–RNA interactions for Protein: Q91X43

Sh3d19, SH3 domain-containing protein 19, mousemouse

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d19Q91X43 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3d19Q91X43 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Sh3d19Q91X43 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3d19Q91X43 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Sh3d19Q91X43 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Sh3d19Q91X43 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3d19Q91X43 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3d19Q91X43 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.98■□□□□ 0.31
Sh3d19Q91X43 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.98■□□□□ 0.31
Sh3d19Q91X43 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3d19Q91X43 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3d19Q91X43 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.98■□□□□ 0.31
Sh3d19Q91X43 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3d19Q91X43 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3d19Q91X43 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3d19Q91X43 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
Sh3d19Q91X43 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.98■□□□□ 0.31
Sh3d19Q91X43 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3d19Q91X43 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Sh3d19Q91X43 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.97■□□□□ 0.31
Sh3d19Q91X43 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3d19Q91X43 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Sh3d19Q91X43 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3d19Q91X43 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3d19Q91X43 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.97■□□□□ 0.31
Sh3d19Q91X43 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3d19Q91X43 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3d19Q91X43 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Sh3d19Q91X43 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3d19Q91X43 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3d19Q91X43 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
Sh3d19Q91X43 Gm12644-201ENSMUST00000119935 606 ntBASIC16.97■□□□□ 0.31
Sh3d19Q91X43 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC16.97■□□□□ 0.31
Sh3d19Q91X43 Gm1818-201ENSMUST00000169406 1184 ntBASIC16.97■□□□□ 0.31
Sh3d19Q91X43 Gm43347-201ENSMUST00000200226 580 ntBASIC16.97■□□□□ 0.31
Sh3d19Q91X43 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3d19Q91X43 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Sh3d19Q91X43 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3d19Q91X43 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3d19Q91X43 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3d19Q91X43 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3d19Q91X43 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Sh3d19Q91X43 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3d19Q91X43 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3d19Q91X43 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3d19Q91X43 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Sh3d19Q91X43 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3d19Q91X43 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC16.97■□□□□ 0.31
Sh3d19Q91X43 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Sh3d19Q91X43 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3d19Q91X43 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3d19Q91X43 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3d19Q91X43 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3d19Q91X43 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3d19Q91X43 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3d19Q91X43 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3d19Q91X43 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3d19Q91X43 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3d19Q91X43 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3d19Q91X43 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3d19Q91X43 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.96■□□□□ 0.31
Sh3d19Q91X43 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3d19Q91X43 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3d19Q91X43 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Sh3d19Q91X43 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3d19Q91X43 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3d19Q91X43 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Sh3d19Q91X43 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Sh3d19Q91X43 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC16.96■□□□□ 0.3
Sh3d19Q91X43 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.96■□□□□ 0.3
Sh3d19Q91X43 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
Sh3d19Q91X43 Haglr-201ENSMUST00000100000 2085 ntBASIC16.95■□□□□ 0.3
Sh3d19Q91X43 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3d19Q91X43 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3d19Q91X43 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.95■□□□□ 0.3
Sh3d19Q91X43 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.95■□□□□ 0.3
Sh3d19Q91X43 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
Sh3d19Q91X43 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3d19Q91X43 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.95■□□□□ 0.3
Sh3d19Q91X43 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.95■□□□□ 0.3
Sh3d19Q91X43 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
Sh3d19Q91X43 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.95■□□□□ 0.3
Sh3d19Q91X43 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3d19Q91X43 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Sh3d19Q91X43 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3d19Q91X43 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3d19Q91X43 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Sh3d19Q91X43 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
Sh3d19Q91X43 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3d19Q91X43 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3d19Q91X43 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3d19Q91X43 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.94■□□□□ 0.3
Sh3d19Q91X43 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3d19Q91X43 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.94■□□□□ 0.3
Sh3d19Q91X43 Gm8349-201ENSMUST00000182720 1003 ntBASIC16.94■□□□□ 0.3
Sh3d19Q91X43 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3d19Q91X43 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Sh3d19Q91X43 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Sh3d19Q91X43 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Sh3d19Q91X43 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms