Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Pcdhb11Q91UZ8 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb11Q91UZ8 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb11Q91UZ8 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb11Q91UZ8 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.73■□□□□ 0.27
Pcdhb11Q91UZ8 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC16.73■□□□□ 0.27
Pcdhb11Q91UZ8 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Pcdhb11Q91UZ8 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb11Q91UZ8 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb11Q91UZ8 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb11Q91UZ8 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb11Q91UZ8 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb11Q91UZ8 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC16.73■□□□□ 0.27
Pcdhb11Q91UZ8 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb11Q91UZ8 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb11Q91UZ8 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.73■□□□□ 0.27
Pcdhb11Q91UZ8 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb11Q91UZ8 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb11Q91UZ8 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb11Q91UZ8 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb11Q91UZ8 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb11Q91UZ8 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb11Q91UZ8 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb11Q91UZ8 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb11Q91UZ8 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb11Q91UZ8 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb11Q91UZ8 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb11Q91UZ8 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb11Q91UZ8 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb11Q91UZ8 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb11Q91UZ8 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb11Q91UZ8 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb11Q91UZ8 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb11Q91UZ8 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb11Q91UZ8 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb11Q91UZ8 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.72■□□□□ 0.27
Pcdhb11Q91UZ8 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
Pcdhb11Q91UZ8 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb11Q91UZ8 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.72■□□□□ 0.27
Pcdhb11Q91UZ8 Gm36967-201ENSMUST00000193814 266 ntBASIC16.72■□□□□ 0.27
Pcdhb11Q91UZ8 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb11Q91UZ8 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb11Q91UZ8 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb11Q91UZ8 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb11Q91UZ8 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb11Q91UZ8 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb11Q91UZ8 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb11Q91UZ8 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.72■□□□□ 0.27
Pcdhb11Q91UZ8 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Pcdhb11Q91UZ8 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb11Q91UZ8 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb11Q91UZ8 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb11Q91UZ8 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb11Q91UZ8 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb11Q91UZ8 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Pcdhb11Q91UZ8 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb11Q91UZ8 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb11Q91UZ8 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb11Q91UZ8 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb11Q91UZ8 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.71■□□□□ 0.27
Pcdhb11Q91UZ8 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb11Q91UZ8 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb11Q91UZ8 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb11Q91UZ8 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb11Q91UZ8 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb11Q91UZ8 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb11Q91UZ8 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb11Q91UZ8 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb11Q91UZ8 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb11Q91UZ8 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb11Q91UZ8 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb11Q91UZ8 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pcdhb11Q91UZ8 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pcdhb11Q91UZ8 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pcdhb11Q91UZ8 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb11Q91UZ8 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb11Q91UZ8 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb11Q91UZ8 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdhb11Q91UZ8 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdhb11Q91UZ8 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdhb11Q91UZ8 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb11Q91UZ8 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdhb11Q91UZ8 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb11Q91UZ8 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb11Q91UZ8 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhb11Q91UZ8 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb11Q91UZ8 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb11Q91UZ8 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb11Q91UZ8 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhb11Q91UZ8 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhb11Q91UZ8 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Pcdhb11Q91UZ8 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhb11Q91UZ8 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhb11Q91UZ8 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb11Q91UZ8 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb11Q91UZ8 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb11Q91UZ8 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC16.69■□□□□ 0.26
Pcdhb11Q91UZ8 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.69■□□□□ 0.26
Pcdhb11Q91UZ8 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb11Q91UZ8 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms