Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lmcd1Q8VEE1 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Lmcd1Q8VEE1 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lmcd1Q8VEE1 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lmcd1Q8VEE1 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lmcd1Q8VEE1 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lmcd1Q8VEE1 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Lmcd1Q8VEE1 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lmcd1Q8VEE1 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
Lmcd1Q8VEE1 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lmcd1Q8VEE1 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lmcd1Q8VEE1 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.34■□□□□ 0.37
Lmcd1Q8VEE1 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Lmcd1Q8VEE1 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Lmcd1Q8VEE1 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Lmcd1Q8VEE1 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Lmcd1Q8VEE1 AC154572.2-201ENSMUST00000225105 997 ntBASIC17.34■□□□□ 0.37
Lmcd1Q8VEE1 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Lmcd1Q8VEE1 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Lmcd1Q8VEE1 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Lmcd1Q8VEE1 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lmcd1Q8VEE1 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lmcd1Q8VEE1 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lmcd1Q8VEE1 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lmcd1Q8VEE1 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lmcd1Q8VEE1 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lmcd1Q8VEE1 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Lmcd1Q8VEE1 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lmcd1Q8VEE1 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lmcd1Q8VEE1 Gm5682-201ENSMUST00000173402 505 ntBASIC17.33■□□□□ 0.36
Lmcd1Q8VEE1 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC17.33■□□□□ 0.36
Lmcd1Q8VEE1 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC17.33■□□□□ 0.36
Lmcd1Q8VEE1 Gm5312-201ENSMUST00000203728 547 ntBASIC17.33■□□□□ 0.36
Lmcd1Q8VEE1 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lmcd1Q8VEE1 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lmcd1Q8VEE1 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Lmcd1Q8VEE1 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Lmcd1Q8VEE1 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Lmcd1Q8VEE1 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lmcd1Q8VEE1 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lmcd1Q8VEE1 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lmcd1Q8VEE1 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Lmcd1Q8VEE1 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lmcd1Q8VEE1 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.32■□□□□ 0.36
Lmcd1Q8VEE1 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Lmcd1Q8VEE1 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lmcd1Q8VEE1 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Lmcd1Q8VEE1 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lmcd1Q8VEE1 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lmcd1Q8VEE1 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lmcd1Q8VEE1 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lmcd1Q8VEE1 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lmcd1Q8VEE1 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lmcd1Q8VEE1 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lmcd1Q8VEE1 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lmcd1Q8VEE1 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lmcd1Q8VEE1 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lmcd1Q8VEE1 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17.32■□□□□ 0.36
Lmcd1Q8VEE1 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lmcd1Q8VEE1 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.32■□□□□ 0.36
Lmcd1Q8VEE1 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Lmcd1Q8VEE1 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lmcd1Q8VEE1 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lmcd1Q8VEE1 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lmcd1Q8VEE1 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Lmcd1Q8VEE1 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lmcd1Q8VEE1 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lmcd1Q8VEE1 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lmcd1Q8VEE1 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lmcd1Q8VEE1 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lmcd1Q8VEE1 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lmcd1Q8VEE1 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lmcd1Q8VEE1 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lmcd1Q8VEE1 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lmcd1Q8VEE1 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lmcd1Q8VEE1 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lmcd1Q8VEE1 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lmcd1Q8VEE1 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lmcd1Q8VEE1 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lmcd1Q8VEE1 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lmcd1Q8VEE1 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lmcd1Q8VEE1 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.31■□□□□ 0.36
Lmcd1Q8VEE1 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lmcd1Q8VEE1 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.31■□□□□ 0.36
Lmcd1Q8VEE1 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lmcd1Q8VEE1 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lmcd1Q8VEE1 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lmcd1Q8VEE1 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.3■□□□□ 0.36
Lmcd1Q8VEE1 Gm27300-201ENSMUST00000184085 97 ntBASIC17.3■□□□□ 0.36
Lmcd1Q8VEE1 Gm27335-201ENSMUST00000184758 97 ntBASIC17.3■□□□□ 0.36
Lmcd1Q8VEE1 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lmcd1Q8VEE1 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Lmcd1Q8VEE1 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lmcd1Q8VEE1 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Lmcd1Q8VEE1 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.3■□□□□ 0.36
Lmcd1Q8VEE1 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lmcd1Q8VEE1 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lmcd1Q8VEE1 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lmcd1Q8VEE1 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Lmcd1Q8VEE1 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms