Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retreg1dQ8VE91 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Retreg1dQ8VE91 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retreg1dQ8VE91 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.2■□□□□ 0.18
Retreg1dQ8VE91 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retreg1dQ8VE91 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Retreg1dQ8VE91 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.2■□□□□ 0.18
Retreg1dQ8VE91 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.19■□□□□ 0.18
Retreg1dQ8VE91 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retreg1dQ8VE91 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retreg1dQ8VE91 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retreg1dQ8VE91 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retreg1dQ8VE91 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retreg1dQ8VE91 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retreg1dQ8VE91 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retreg1dQ8VE91 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retreg1dQ8VE91 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Retreg1dQ8VE91 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retreg1dQ8VE91 Gm27742-201ENSMUST00000184667 60 ntBASIC16.19■□□□□ 0.18
Retreg1dQ8VE91 Gm45328-201ENSMUST00000210942 917 ntBASIC16.19■□□□□ 0.18
Retreg1dQ8VE91 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.19■□□□□ 0.18
Retreg1dQ8VE91 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.19■□□□□ 0.18
Retreg1dQ8VE91 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retreg1dQ8VE91 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retreg1dQ8VE91 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retreg1dQ8VE91 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retreg1dQ8VE91 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retreg1dQ8VE91 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retreg1dQ8VE91 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Retreg1dQ8VE91 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Retreg1dQ8VE91 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retreg1dQ8VE91 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.19■□□□□ 0.18
Retreg1dQ8VE91 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retreg1dQ8VE91 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retreg1dQ8VE91 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retreg1dQ8VE91 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retreg1dQ8VE91 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retreg1dQ8VE91 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Retreg1dQ8VE91 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retreg1dQ8VE91 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.18■□□□□ 0.18
Retreg1dQ8VE91 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retreg1dQ8VE91 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retreg1dQ8VE91 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retreg1dQ8VE91 Gm28033-201ENSMUST00000184224 96 ntBASIC16.18■□□□□ 0.18
Retreg1dQ8VE91 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retreg1dQ8VE91 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retreg1dQ8VE91 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Retreg1dQ8VE91 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Retreg1dQ8VE91 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retreg1dQ8VE91 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retreg1dQ8VE91 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retreg1dQ8VE91 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.18■□□□□ 0.18
Retreg1dQ8VE91 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Retreg1dQ8VE91 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Retreg1dQ8VE91 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retreg1dQ8VE91 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retreg1dQ8VE91 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retreg1dQ8VE91 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.17■□□□□ 0.18
Retreg1dQ8VE91 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retreg1dQ8VE91 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.17■□□□□ 0.18
Retreg1dQ8VE91 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retreg1dQ8VE91 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
Retreg1dQ8VE91 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retreg1dQ8VE91 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.17■□□□□ 0.18
Retreg1dQ8VE91 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.17■□□□□ 0.18
Retreg1dQ8VE91 Mir3081-201ENSMUST00000175305 84 ntBASIC16.17■□□□□ 0.18
Retreg1dQ8VE91 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.17■□□□□ 0.18
Retreg1dQ8VE91 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retreg1dQ8VE91 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retreg1dQ8VE91 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retreg1dQ8VE91 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Retreg1dQ8VE91 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.17■□□□□ 0.18
Retreg1dQ8VE91 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Retreg1dQ8VE91 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Retreg1dQ8VE91 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retreg1dQ8VE91 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retreg1dQ8VE91 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retreg1dQ8VE91 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retreg1dQ8VE91 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retreg1dQ8VE91 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retreg1dQ8VE91 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retreg1dQ8VE91 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retreg1dQ8VE91 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retreg1dQ8VE91 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retreg1dQ8VE91 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retreg1dQ8VE91 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retreg1dQ8VE91 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retreg1dQ8VE91 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Retreg1dQ8VE91 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.16■□□□□ 0.18
Retreg1dQ8VE91 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Retreg1dQ8VE91 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retreg1dQ8VE91 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retreg1dQ8VE91 Gm18669-201ENSMUST00000216049 778 ntBASIC16.16■□□□□ 0.18
Retreg1dQ8VE91 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retreg1dQ8VE91 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retreg1dQ8VE91 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
Retreg1dQ8VE91 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Retreg1dQ8VE91 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retreg1dQ8VE91 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retreg1dQ8VE91 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms