Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.79■□□□□ 0.28
Rprd1aQ8VDS4 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rprd1aQ8VDS4 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rprd1aQ8VDS4 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rprd1aQ8VDS4 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rprd1aQ8VDS4 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rprd1aQ8VDS4 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rprd1aQ8VDS4 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rprd1aQ8VDS4 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rprd1aQ8VDS4 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rprd1aQ8VDS4 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Rprd1aQ8VDS4 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rprd1aQ8VDS4 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rprd1aQ8VDS4 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC16.79■□□□□ 0.28
Rprd1aQ8VDS4 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Rprd1aQ8VDS4 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.79■□□□□ 0.28
Rprd1aQ8VDS4 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rprd1aQ8VDS4 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rprd1aQ8VDS4 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rprd1aQ8VDS4 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rprd1aQ8VDS4 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rprd1aQ8VDS4 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rprd1aQ8VDS4 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.78■□□□□ 0.28
Rprd1aQ8VDS4 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
Rprd1aQ8VDS4 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rprd1aQ8VDS4 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Rprd1aQ8VDS4 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rprd1aQ8VDS4 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rprd1aQ8VDS4 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rprd1aQ8VDS4 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Rprd1aQ8VDS4 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.78■□□□□ 0.28
Rprd1aQ8VDS4 Olfr129-201ENSMUST00000122318 993 ntBASIC16.78■□□□□ 0.28
Rprd1aQ8VDS4 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.78■□□□□ 0.28
Rprd1aQ8VDS4 Gm17807-201ENSMUST00000186869 298 ntBASIC16.78■□□□□ 0.28
Rprd1aQ8VDS4 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Rprd1aQ8VDS4 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rprd1aQ8VDS4 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.78■□□□□ 0.28
Rprd1aQ8VDS4 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.78■□□□□ 0.28
Rprd1aQ8VDS4 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rprd1aQ8VDS4 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.78■□□□□ 0.28
Rprd1aQ8VDS4 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.78■□□□□ 0.28
Rprd1aQ8VDS4 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rprd1aQ8VDS4 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rprd1aQ8VDS4 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rprd1aQ8VDS4 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rprd1aQ8VDS4 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.28
Rprd1aQ8VDS4 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.77■□□□□ 0.28
Rprd1aQ8VDS4 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rprd1aQ8VDS4 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rprd1aQ8VDS4 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rprd1aQ8VDS4 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rprd1aQ8VDS4 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rprd1aQ8VDS4 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rprd1aQ8VDS4 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Rprd1aQ8VDS4 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rprd1aQ8VDS4 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Rprd1aQ8VDS4 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.77■□□□□ 0.28
Rprd1aQ8VDS4 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.77■□□□□ 0.28
Rprd1aQ8VDS4 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rprd1aQ8VDS4 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rprd1aQ8VDS4 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rprd1aQ8VDS4 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Rprd1aQ8VDS4 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Rprd1aQ8VDS4 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rprd1aQ8VDS4 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rprd1aQ8VDS4 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
Rprd1aQ8VDS4 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rprd1aQ8VDS4 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rprd1aQ8VDS4 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rprd1aQ8VDS4 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rprd1aQ8VDS4 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC16.76■□□□□ 0.27
Rprd1aQ8VDS4 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rprd1aQ8VDS4 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rprd1aQ8VDS4 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rprd1aQ8VDS4 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rprd1aQ8VDS4 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rprd1aQ8VDS4 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.76■□□□□ 0.27
Rprd1aQ8VDS4 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rprd1aQ8VDS4 Mir3081-201ENSMUST00000175305 84 ntBASIC16.76■□□□□ 0.27
Rprd1aQ8VDS4 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rprd1aQ8VDS4 Gm44430-201ENSMUST00000203376 995 ntBASIC16.76■□□□□ 0.27
Rprd1aQ8VDS4 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Rprd1aQ8VDS4 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rprd1aQ8VDS4 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rprd1aQ8VDS4 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Rprd1aQ8VDS4 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rprd1aQ8VDS4 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rprd1aQ8VDS4 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rprd1aQ8VDS4 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rprd1aQ8VDS4 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rprd1aQ8VDS4 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rprd1aQ8VDS4 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Rprd1aQ8VDS4 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rprd1aQ8VDS4 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.75■□□□□ 0.27
Rprd1aQ8VDS4 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC16.75■□□□□ 0.27
Rprd1aQ8VDS4 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rprd1aQ8VDS4 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rprd1aQ8VDS4 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC16.75■□□□□ 0.27
Rprd1aQ8VDS4 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rprd1aQ8VDS4 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms