Protein–RNA interactions for Protein: Q8VCE1

Dnajc28, DnaJ homolog subfamily C member 28, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnajc28Q8VCE1 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Dnajc28Q8VCE1 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Dnajc28Q8VCE1 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC17.79■□□□□ 0.44
Dnajc28Q8VCE1 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Dnajc28Q8VCE1 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.79■□□□□ 0.44
Dnajc28Q8VCE1 Gm6443-201ENSMUST00000203599 874 ntBASIC17.79■□□□□ 0.44
Dnajc28Q8VCE1 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Dnajc28Q8VCE1 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Dnajc28Q8VCE1 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Dnajc28Q8VCE1 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Dnajc28Q8VCE1 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Dnajc28Q8VCE1 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Dnajc28Q8VCE1 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Dnajc28Q8VCE1 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Dnajc28Q8VCE1 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Dnajc28Q8VCE1 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Dnajc28Q8VCE1 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Dnajc28Q8VCE1 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.78■□□□□ 0.44
Dnajc28Q8VCE1 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Dnajc28Q8VCE1 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC17.78■□□□□ 0.44
Dnajc28Q8VCE1 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Dnajc28Q8VCE1 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Dnajc28Q8VCE1 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.78■□□□□ 0.44
Dnajc28Q8VCE1 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Dnajc28Q8VCE1 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Dnajc28Q8VCE1 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Dnajc28Q8VCE1 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Dnajc28Q8VCE1 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Dnajc28Q8VCE1 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Dnajc28Q8VCE1 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Dnajc28Q8VCE1 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Dnajc28Q8VCE1 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Dnajc28Q8VCE1 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Dnajc28Q8VCE1 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Dnajc28Q8VCE1 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Dnajc28Q8VCE1 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.77■□□□□ 0.44
Dnajc28Q8VCE1 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Dnajc28Q8VCE1 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Dnajc28Q8VCE1 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Dnajc28Q8VCE1 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Dnajc28Q8VCE1 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Dnajc28Q8VCE1 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Dnajc28Q8VCE1 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.77■□□□□ 0.44
Dnajc28Q8VCE1 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Dnajc28Q8VCE1 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Dnajc28Q8VCE1 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.77■□□□□ 0.44
Dnajc28Q8VCE1 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.77■□□□□ 0.44
Dnajc28Q8VCE1 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Dnajc28Q8VCE1 Gm43514-201ENSMUST00000198852 424 ntBASIC17.77■□□□□ 0.44
Dnajc28Q8VCE1 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Dnajc28Q8VCE1 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.77■□□□□ 0.44
Dnajc28Q8VCE1 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Dnajc28Q8VCE1 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Dnajc28Q8VCE1 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Dnajc28Q8VCE1 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Dnajc28Q8VCE1 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Dnajc28Q8VCE1 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Dnajc28Q8VCE1 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Dnajc28Q8VCE1 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Dnajc28Q8VCE1 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Dnajc28Q8VCE1 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Dnajc28Q8VCE1 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Dnajc28Q8VCE1 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.77■□□□□ 0.43
Dnajc28Q8VCE1 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Dnajc28Q8VCE1 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Dnajc28Q8VCE1 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Dnajc28Q8VCE1 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Dnajc28Q8VCE1 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.76■□□□□ 0.43
Dnajc28Q8VCE1 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Dnajc28Q8VCE1 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Dnajc28Q8VCE1 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Dnajc28Q8VCE1 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Dnajc28Q8VCE1 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Dnajc28Q8VCE1 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Dnajc28Q8VCE1 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Dnajc28Q8VCE1 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Dnajc28Q8VCE1 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.76■□□□□ 0.43
Dnajc28Q8VCE1 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
Dnajc28Q8VCE1 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Dnajc28Q8VCE1 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.76■□□□□ 0.43
Dnajc28Q8VCE1 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Dnajc28Q8VCE1 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Dnajc28Q8VCE1 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.76■□□□□ 0.43
Dnajc28Q8VCE1 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Dnajc28Q8VCE1 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Dnajc28Q8VCE1 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Dnajc28Q8VCE1 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Dnajc28Q8VCE1 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Dnajc28Q8VCE1 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Dnajc28Q8VCE1 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Dnajc28Q8VCE1 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Dnajc28Q8VCE1 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Dnajc28Q8VCE1 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Dnajc28Q8VCE1 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Dnajc28Q8VCE1 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Dnajc28Q8VCE1 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Dnajc28Q8VCE1 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Dnajc28Q8VCE1 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.75■□□□□ 0.43
Dnajc28Q8VCE1 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Dnajc28Q8VCE1 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms