Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ndc1Q8VCB1 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
Ndc1Q8VCB1 Gm24589-201ENSMUST00000116692 94 ntBASIC15.4■□□□□ 0.06
Ndc1Q8VCB1 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.4■□□□□ 0.06
Ndc1Q8VCB1 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ndc1Q8VCB1 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC15.4■□□□□ 0.06
Ndc1Q8VCB1 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.4■□□□□ 0.06
Ndc1Q8VCB1 Gm7461-201ENSMUST00000058918 827 ntBASIC15.4■□□□□ 0.06
Ndc1Q8VCB1 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ndc1Q8VCB1 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Ndc1Q8VCB1 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC15.4■□□□□ 0.06
Ndc1Q8VCB1 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ndc1Q8VCB1 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ndc1Q8VCB1 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ndc1Q8VCB1 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ndc1Q8VCB1 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Ndc1Q8VCB1 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ndc1Q8VCB1 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.4■□□□□ 0.06
Ndc1Q8VCB1 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.4■□□□□ 0.06
Ndc1Q8VCB1 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Ndc1Q8VCB1 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Ndc1Q8VCB1 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ndc1Q8VCB1 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Ndc1Q8VCB1 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.4■□□□□ 0.06
Ndc1Q8VCB1 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.39■□□□□ 0.06
Ndc1Q8VCB1 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ndc1Q8VCB1 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ndc1Q8VCB1 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.39■□□□□ 0.05
Ndc1Q8VCB1 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Ndc1Q8VCB1 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ndc1Q8VCB1 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ndc1Q8VCB1 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ndc1Q8VCB1 Gm45203-201ENSMUST00000206384 1831 ntBASIC15.39■□□□□ 0.05
Ndc1Q8VCB1 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.39■□□□□ 0.05
Ndc1Q8VCB1 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
Ndc1Q8VCB1 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC15.39■□□□□ 0.05
Ndc1Q8VCB1 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ndc1Q8VCB1 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Ndc1Q8VCB1 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ndc1Q8VCB1 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ndc1Q8VCB1 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Ndc1Q8VCB1 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ndc1Q8VCB1 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ndc1Q8VCB1 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ndc1Q8VCB1 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ndc1Q8VCB1 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Ndc1Q8VCB1 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ndc1Q8VCB1 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ndc1Q8VCB1 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ndc1Q8VCB1 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ndc1Q8VCB1 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ndc1Q8VCB1 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ndc1Q8VCB1 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Ndc1Q8VCB1 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.39■□□□□ 0.05
Ndc1Q8VCB1 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Ndc1Q8VCB1 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ndc1Q8VCB1 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ndc1Q8VCB1 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ndc1Q8VCB1 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ndc1Q8VCB1 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ndc1Q8VCB1 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ndc1Q8VCB1 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ndc1Q8VCB1 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ndc1Q8VCB1 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ndc1Q8VCB1 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ndc1Q8VCB1 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ndc1Q8VCB1 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ndc1Q8VCB1 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ndc1Q8VCB1 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.38■□□□□ 0.05
Ndc1Q8VCB1 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ndc1Q8VCB1 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ndc1Q8VCB1 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ndc1Q8VCB1 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.38■□□□□ 0.05
Ndc1Q8VCB1 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ndc1Q8VCB1 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ndc1Q8VCB1 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Ndc1Q8VCB1 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ndc1Q8VCB1 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Ndc1Q8VCB1 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ndc1Q8VCB1 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.37■□□□□ 0.05
Ndc1Q8VCB1 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ndc1Q8VCB1 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ndc1Q8VCB1 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Ndc1Q8VCB1 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC15.37■□□□□ 0.05
Ndc1Q8VCB1 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ndc1Q8VCB1 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ndc1Q8VCB1 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ndc1Q8VCB1 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ndc1Q8VCB1 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ndc1Q8VCB1 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC15.37■□□□□ 0.05
Ndc1Q8VCB1 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ndc1Q8VCB1 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ndc1Q8VCB1 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.37■□□□□ 0.05
Ndc1Q8VCB1 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ndc1Q8VCB1 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Ndc1Q8VCB1 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ndc1Q8VCB1 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ndc1Q8VCB1 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ndc1Q8VCB1 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Ndc1Q8VCB1 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms