Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Rpap2Q8VC34 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rpap2Q8VC34 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rpap2Q8VC34 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rpap2Q8VC34 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Rpap2Q8VC34 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rpap2Q8VC34 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Rpap2Q8VC34 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rpap2Q8VC34 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Rpap2Q8VC34 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rpap2Q8VC34 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rpap2Q8VC34 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.93■□□□□ 0.46
Rpap2Q8VC34 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rpap2Q8VC34 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rpap2Q8VC34 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
Rpap2Q8VC34 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rpap2Q8VC34 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rpap2Q8VC34 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Rpap2Q8VC34 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rpap2Q8VC34 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rpap2Q8VC34 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rpap2Q8VC34 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC17.93■□□□□ 0.46
Rpap2Q8VC34 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Rpap2Q8VC34 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpap2Q8VC34 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC17.92■□□□□ 0.46
Rpap2Q8VC34 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpap2Q8VC34 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rpap2Q8VC34 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.92■□□□□ 0.46
Rpap2Q8VC34 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.92■□□□□ 0.46
Rpap2Q8VC34 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rpap2Q8VC34 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpap2Q8VC34 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpap2Q8VC34 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Rpap2Q8VC34 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Rpap2Q8VC34 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rpap2Q8VC34 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rpap2Q8VC34 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.92■□□□□ 0.46
Rpap2Q8VC34 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rpap2Q8VC34 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rpap2Q8VC34 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.92■□□□□ 0.46
Rpap2Q8VC34 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Rpap2Q8VC34 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Rpap2Q8VC34 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpap2Q8VC34 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpap2Q8VC34 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpap2Q8VC34 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rpap2Q8VC34 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpap2Q8VC34 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpap2Q8VC34 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpap2Q8VC34 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpap2Q8VC34 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpap2Q8VC34 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Rpap2Q8VC34 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Rpap2Q8VC34 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpap2Q8VC34 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Rpap2Q8VC34 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpap2Q8VC34 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpap2Q8VC34 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.91■□□□□ 0.46
Rpap2Q8VC34 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rpap2Q8VC34 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpap2Q8VC34 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpap2Q8VC34 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpap2Q8VC34 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rpap2Q8VC34 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpap2Q8VC34 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpap2Q8VC34 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rpap2Q8VC34 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.91■□□□□ 0.46
Rpap2Q8VC34 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Rpap2Q8VC34 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpap2Q8VC34 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpap2Q8VC34 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rpap2Q8VC34 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Rpap2Q8VC34 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpap2Q8VC34 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpap2Q8VC34 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpap2Q8VC34 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpap2Q8VC34 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rpap2Q8VC34 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpap2Q8VC34 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpap2Q8VC34 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rpap2Q8VC34 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rpap2Q8VC34 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpap2Q8VC34 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpap2Q8VC34 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpap2Q8VC34 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rpap2Q8VC34 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Rpap2Q8VC34 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Rpap2Q8VC34 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rpap2Q8VC34 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpap2Q8VC34 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rpap2Q8VC34 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rpap2Q8VC34 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpap2Q8VC34 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpap2Q8VC34 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpap2Q8VC34 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpap2Q8VC34 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
Rpap2Q8VC34 Gm7977-201ENSMUST00000193787 748 ntBASIC17.89■□□□□ 0.45
Rpap2Q8VC34 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.89■□□□□ 0.45
Rpap2Q8VC34 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rpap2Q8VC34 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms