Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm18666-201ENSMUST00000190039 958 ntBASIC13.37□□□□□ -0.27
Nup35Q8R4R6 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Nup35Q8R4R6 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup35Q8R4R6 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Nup35Q8R4R6 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup35Q8R4R6 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Nup35Q8R4R6 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Nup35Q8R4R6 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup35Q8R4R6 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.37□□□□□ -0.27
Nup35Q8R4R6 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.37□□□□□ -0.27
Nup35Q8R4R6 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Nup35Q8R4R6 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Nup35Q8R4R6 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.37□□□□□ -0.27
Nup35Q8R4R6 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup35Q8R4R6 AC124581.1-201ENSMUST00000225416 1399 ntBASIC13.36□□□□□ -0.27
Nup35Q8R4R6 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup35Q8R4R6 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup35Q8R4R6 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Nup35Q8R4R6 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup35Q8R4R6 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup35Q8R4R6 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup35Q8R4R6 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup35Q8R4R6 H2-K2-201ENSMUST00000174250 1049 ntBASIC13.36□□□□□ -0.27
Nup35Q8R4R6 Gm18958-201ENSMUST00000174258 762 ntBASIC13.36□□□□□ -0.27
Nup35Q8R4R6 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nup35Q8R4R6 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC13.36□□□□□ -0.27
Nup35Q8R4R6 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC13.36□□□□□ -0.27
Nup35Q8R4R6 AC120002.2-201ENSMUST00000220205 773 ntBASIC13.36□□□□□ -0.27
Nup35Q8R4R6 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Nup35Q8R4R6 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nup35Q8R4R6 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup35Q8R4R6 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Nup35Q8R4R6 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.36□□□□□ -0.27
Nup35Q8R4R6 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nup35Q8R4R6 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup35Q8R4R6 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup35Q8R4R6 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup35Q8R4R6 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup35Q8R4R6 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Nup35Q8R4R6 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Nup35Q8R4R6 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nup35Q8R4R6 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Nup35Q8R4R6 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Nup35Q8R4R6 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup35Q8R4R6 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup35Q8R4R6 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup35Q8R4R6 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup35Q8R4R6 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nup35Q8R4R6 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Nup35Q8R4R6 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC13.35□□□□□ -0.27
Nup35Q8R4R6 Gm8495-201ENSMUST00000188740 694 ntBASIC13.35□□□□□ -0.27
Nup35Q8R4R6 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup35Q8R4R6 Il3ra-202ENSMUST00000223589 738 ntBASIC13.35□□□□□ -0.27
Nup35Q8R4R6 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nup35Q8R4R6 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nup35Q8R4R6 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup35Q8R4R6 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup35Q8R4R6 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Nup35Q8R4R6 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup35Q8R4R6 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Nup35Q8R4R6 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Nup35Q8R4R6 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup35Q8R4R6 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Nup35Q8R4R6 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC13.34□□□□□ -0.27
Nup35Q8R4R6 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nup35Q8R4R6 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nup35Q8R4R6 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
Nup35Q8R4R6 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nup35Q8R4R6 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Nup35Q8R4R6 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nup35Q8R4R6 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nup35Q8R4R6 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nup35Q8R4R6 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nup35Q8R4R6 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nup35Q8R4R6 Gm7638-201ENSMUST00000121348 967 ntBASIC13.34□□□□□ -0.27
Nup35Q8R4R6 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC13.34□□□□□ -0.27
Nup35Q8R4R6 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Nup35Q8R4R6 Gm37179-201ENSMUST00000194862 823 ntBASIC13.34□□□□□ -0.27
Nup35Q8R4R6 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nup35Q8R4R6 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nup35Q8R4R6 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nup35Q8R4R6 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.34□□□□□ -0.27
Nup35Q8R4R6 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Nup35Q8R4R6 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Nup35Q8R4R6 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nup35Q8R4R6 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nup35Q8R4R6 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Nup35Q8R4R6 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.34□□□□□ -0.27
Nup35Q8R4R6 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Nup35Q8R4R6 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nup35Q8R4R6 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nup35Q8R4R6 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Nup35Q8R4R6 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Nup35Q8R4R6 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nup35Q8R4R6 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC13.33□□□□□ -0.28
Nup35Q8R4R6 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC13.33□□□□□ -0.28
Nup35Q8R4R6 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Nup35Q8R4R6 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Nup35Q8R4R6 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Nup35Q8R4R6 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms