Protein–RNA interactions for Protein: Q8R332

Nup58, Nucleoporin p58/p45, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup58Q8R332 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nup58Q8R332 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Nup58Q8R332 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nup58Q8R332 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Nup58Q8R332 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nup58Q8R332 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nup58Q8R332 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Nup58Q8R332 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.51■□□□□ 0.39
Nup58Q8R332 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nup58Q8R332 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nup58Q8R332 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nup58Q8R332 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nup58Q8R332 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nup58Q8R332 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.51■□□□□ 0.39
Nup58Q8R332 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nup58Q8R332 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nup58Q8R332 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nup58Q8R332 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nup58Q8R332 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.5■□□□□ 0.39
Nup58Q8R332 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nup58Q8R332 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nup58Q8R332 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
Nup58Q8R332 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nup58Q8R332 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nup58Q8R332 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nup58Q8R332 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nup58Q8R332 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nup58Q8R332 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup58Q8R332 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nup58Q8R332 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup58Q8R332 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nup58Q8R332 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Nup58Q8R332 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.49■□□□□ 0.39
Nup58Q8R332 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nup58Q8R332 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nup58Q8R332 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup58Q8R332 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup58Q8R332 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup58Q8R332 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC17.49■□□□□ 0.39
Nup58Q8R332 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup58Q8R332 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Nup58Q8R332 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nup58Q8R332 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.49■□□□□ 0.39
Nup58Q8R332 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup58Q8R332 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nup58Q8R332 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Nup58Q8R332 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.49■□□□□ 0.39
Nup58Q8R332 AC159205.6-201ENSMUST00000224935 887 ntBASIC17.49■□□□□ 0.39
Nup58Q8R332 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup58Q8R332 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup58Q8R332 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup58Q8R332 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup58Q8R332 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup58Q8R332 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup58Q8R332 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nup58Q8R332 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nup58Q8R332 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nup58Q8R332 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nup58Q8R332 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nup58Q8R332 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Nup58Q8R332 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC17.48■□□□□ 0.39
Nup58Q8R332 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nup58Q8R332 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nup58Q8R332 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.48■□□□□ 0.39
Nup58Q8R332 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Nup58Q8R332 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.48■□□□□ 0.39
Nup58Q8R332 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nup58Q8R332 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC17.48■□□□□ 0.39
Nup58Q8R332 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
Nup58Q8R332 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nup58Q8R332 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nup58Q8R332 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nup58Q8R332 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nup58Q8R332 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nup58Q8R332 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Nup58Q8R332 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nup58Q8R332 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nup58Q8R332 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nup58Q8R332 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nup58Q8R332 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup58Q8R332 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup58Q8R332 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nup58Q8R332 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup58Q8R332 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup58Q8R332 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup58Q8R332 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nup58Q8R332 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nup58Q8R332 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup58Q8R332 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup58Q8R332 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Nup58Q8R332 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nup58Q8R332 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup58Q8R332 Gm7889-201ENSMUST00000185591 958 ntBASIC17.47■□□□□ 0.39
Nup58Q8R332 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup58Q8R332 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup58Q8R332 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup58Q8R332 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup58Q8R332 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup58Q8R332 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup58Q8R332 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms