Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rpp40Q8R1F9 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rpp40Q8R1F9 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Rpp40Q8R1F9 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rpp40Q8R1F9 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rpp40Q8R1F9 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rpp40Q8R1F9 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Rpp40Q8R1F9 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rpp40Q8R1F9 Rprl3-201ENSMUST00000157400 290 ntBASIC17.47■□□□□ 0.39
Rpp40Q8R1F9 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rpp40Q8R1F9 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Rpp40Q8R1F9 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Rpp40Q8R1F9 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Rpp40Q8R1F9 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Rpp40Q8R1F9 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.47■□□□□ 0.39
Rpp40Q8R1F9 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Rpp40Q8R1F9 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Rpp40Q8R1F9 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rpp40Q8R1F9 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Rpp40Q8R1F9 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Rpp40Q8R1F9 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rpp40Q8R1F9 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rpp40Q8R1F9 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rpp40Q8R1F9 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Rpp40Q8R1F9 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rpp40Q8R1F9 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Rpp40Q8R1F9 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
Rpp40Q8R1F9 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
Rpp40Q8R1F9 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
Rpp40Q8R1F9 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rpp40Q8R1F9 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.46■□□□□ 0.39
Rpp40Q8R1F9 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Rpp40Q8R1F9 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Rpp40Q8R1F9 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rpp40Q8R1F9 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rpp40Q8R1F9 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rpp40Q8R1F9 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Rpp40Q8R1F9 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.45■□□□□ 0.38
Rpp40Q8R1F9 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rpp40Q8R1F9 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.45■□□□□ 0.38
Rpp40Q8R1F9 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rpp40Q8R1F9 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rpp40Q8R1F9 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Rpp40Q8R1F9 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Rpp40Q8R1F9 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Rpp40Q8R1F9 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpp40Q8R1F9 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rpp40Q8R1F9 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Rpp40Q8R1F9 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpp40Q8R1F9 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rpp40Q8R1F9 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rpp40Q8R1F9 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpp40Q8R1F9 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
Rpp40Q8R1F9 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpp40Q8R1F9 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpp40Q8R1F9 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Rpp40Q8R1F9 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpp40Q8R1F9 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.44■□□□□ 0.38
Rpp40Q8R1F9 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Rpp40Q8R1F9 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpp40Q8R1F9 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
Rpp40Q8R1F9 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpp40Q8R1F9 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Rpp40Q8R1F9 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.44■□□□□ 0.38
Rpp40Q8R1F9 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpp40Q8R1F9 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpp40Q8R1F9 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.44■□□□□ 0.38
Rpp40Q8R1F9 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpp40Q8R1F9 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Rpp40Q8R1F9 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpp40Q8R1F9 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Rpp40Q8R1F9 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpp40Q8R1F9 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Rpp40Q8R1F9 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rpp40Q8R1F9 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rpp40Q8R1F9 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rpp40Q8R1F9 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rpp40Q8R1F9 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rpp40Q8R1F9 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rpp40Q8R1F9 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rpp40Q8R1F9 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rpp40Q8R1F9 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.43■□□□□ 0.38
Rpp40Q8R1F9 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.43■□□□□ 0.38
Rpp40Q8R1F9 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC17.43■□□□□ 0.38
Rpp40Q8R1F9 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.43■□□□□ 0.38
Rpp40Q8R1F9 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rpp40Q8R1F9 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rpp40Q8R1F9 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rpp40Q8R1F9 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rpp40Q8R1F9 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Rpp40Q8R1F9 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.43■□□□□ 0.38
Rpp40Q8R1F9 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Rpp40Q8R1F9 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.43■□□□□ 0.38
Rpp40Q8R1F9 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Rpp40Q8R1F9 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpp40Q8R1F9 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Rpp40Q8R1F9 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Rpp40Q8R1F9 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpp40Q8R1F9 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Rpp40Q8R1F9 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms