Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf4Q8K4J2 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf4Q8K4J2 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf4Q8K4J2 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf4Q8K4J2 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf4Q8K4J2 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf4Q8K4J2 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Ebf4Q8K4J2 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf4Q8K4J2 Gm15375-201ENSMUST00000119510 849 ntBASIC14.94□□□□□ -0.02
Ebf4Q8K4J2 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf4Q8K4J2 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC14.94□□□□□ -0.02
Ebf4Q8K4J2 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf4Q8K4J2 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf4Q8K4J2 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.94□□□□□ -0.02
Ebf4Q8K4J2 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf4Q8K4J2 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.94□□□□□ -0.02
Ebf4Q8K4J2 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf4Q8K4J2 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Ebf4Q8K4J2 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf4Q8K4J2 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ebf4Q8K4J2 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf4Q8K4J2 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf4Q8K4J2 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf4Q8K4J2 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf4Q8K4J2 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.93□□□□□ -0.02
Ebf4Q8K4J2 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf4Q8K4J2 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf4Q8K4J2 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.93□□□□□ -0.02
Ebf4Q8K4J2 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf4Q8K4J2 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.93□□□□□ -0.02
Ebf4Q8K4J2 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf4Q8K4J2 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC14.93□□□□□ -0.02
Ebf4Q8K4J2 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf4Q8K4J2 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf4Q8K4J2 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf4Q8K4J2 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf4Q8K4J2 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf4Q8K4J2 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf4Q8K4J2 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf4Q8K4J2 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf4Q8K4J2 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf4Q8K4J2 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf4Q8K4J2 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf4Q8K4J2 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.93□□□□□ -0.02
Ebf4Q8K4J2 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ebf4Q8K4J2 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf4Q8K4J2 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf4Q8K4J2 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf4Q8K4J2 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf4Q8K4J2 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.92□□□□□ -0.02
Ebf4Q8K4J2 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf4Q8K4J2 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf4Q8K4J2 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf4Q8K4J2 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Ebf4Q8K4J2 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Ebf4Q8K4J2 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC14.92□□□□□ -0.02
Ebf4Q8K4J2 Gm27000-201ENSMUST00000182943 842 ntBASIC14.92□□□□□ -0.02
Ebf4Q8K4J2 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf4Q8K4J2 Gm5874-201ENSMUST00000096101 508 ntBASIC14.92□□□□□ -0.02
Ebf4Q8K4J2 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf4Q8K4J2 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf4Q8K4J2 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.92□□□□□ -0.02
Ebf4Q8K4J2 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.92□□□□□ -0.02
Ebf4Q8K4J2 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf4Q8K4J2 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf4Q8K4J2 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf4Q8K4J2 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Ebf4Q8K4J2 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf4Q8K4J2 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf4Q8K4J2 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf4Q8K4J2 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.92□□□□□ -0.02
Ebf4Q8K4J2 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf4Q8K4J2 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf4Q8K4J2 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf4Q8K4J2 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf4Q8K4J2 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf4Q8K4J2 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ebf4Q8K4J2 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.92□□□□□ -0.02
Ebf4Q8K4J2 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ebf4Q8K4J2 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ebf4Q8K4J2 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ebf4Q8K4J2 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ebf4Q8K4J2 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ebf4Q8K4J2 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
Ebf4Q8K4J2 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ebf4Q8K4J2 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ebf4Q8K4J2 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Ebf4Q8K4J2 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC14.91□□□□□ -0.02
Ebf4Q8K4J2 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ebf4Q8K4J2 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ebf4Q8K4J2 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Ebf4Q8K4J2 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ebf4Q8K4J2 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.91□□□□□ -0.02
Ebf4Q8K4J2 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ebf4Q8K4J2 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ebf4Q8K4J2 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ebf4Q8K4J2 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
Ebf4Q8K4J2 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Ebf4Q8K4J2 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Ebf4Q8K4J2 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms