Protein–RNA interactions for Protein: Q8K4E0

Alms1, Alstrom syndrome protein 1 homolog, mousemouse

Predictions only

Length 3,251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alms1Q8K4E0 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.94■□□□□ 0.14
Alms1Q8K4E0 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Alms1Q8K4E0 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Alms1Q8K4E0 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Alms1Q8K4E0 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC15.94■□□□□ 0.14
Alms1Q8K4E0 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Alms1Q8K4E0 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Alms1Q8K4E0 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.94■□□□□ 0.14
Alms1Q8K4E0 AC158982.1-201ENSMUST00000228377 901 ntBASIC15.94■□□□□ 0.14
Alms1Q8K4E0 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Alms1Q8K4E0 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Alms1Q8K4E0 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Alms1Q8K4E0 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Alms1Q8K4E0 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Alms1Q8K4E0 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Alms1Q8K4E0 Gm8097-201ENSMUST00000117903 829 ntBASIC15.93■□□□□ 0.14
Alms1Q8K4E0 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC15.93■□□□□ 0.14
Alms1Q8K4E0 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.93■□□□□ 0.14
Alms1Q8K4E0 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Alms1Q8K4E0 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.93■□□□□ 0.14
Alms1Q8K4E0 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
Alms1Q8K4E0 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Alms1Q8K4E0 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Alms1Q8K4E0 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Alms1Q8K4E0 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC15.93■□□□□ 0.14
Alms1Q8K4E0 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Alms1Q8K4E0 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC15.93■□□□□ 0.14
Alms1Q8K4E0 Gm24513-201ENSMUST00000174964 138 ntBASIC15.93■□□□□ 0.14
Alms1Q8K4E0 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC15.93■□□□□ 0.14
Alms1Q8K4E0 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Alms1Q8K4E0 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC15.93■□□□□ 0.14
Alms1Q8K4E0 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Alms1Q8K4E0 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Alms1Q8K4E0 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.93■□□□□ 0.14
Alms1Q8K4E0 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Alms1Q8K4E0 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Alms1Q8K4E0 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Alms1Q8K4E0 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC15.93■□□□□ 0.14
Alms1Q8K4E0 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Alms1Q8K4E0 Gm27321-201ENSMUST00000185021 205 ntBASIC15.93■□□□□ 0.14
Alms1Q8K4E0 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Alms1Q8K4E0 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
Alms1Q8K4E0 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Alms1Q8K4E0 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Alms1Q8K4E0 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Alms1Q8K4E0 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Alms1Q8K4E0 Gm13036-201ENSMUST00000117799 748 ntBASIC15.92■□□□□ 0.14
Alms1Q8K4E0 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Alms1Q8K4E0 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC15.92■□□□□ 0.14
Alms1Q8K4E0 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Alms1Q8K4E0 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC15.92■□□□□ 0.14
Alms1Q8K4E0 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Alms1Q8K4E0 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Alms1Q8K4E0 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Alms1Q8K4E0 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Alms1Q8K4E0 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC15.92■□□□□ 0.14
Alms1Q8K4E0 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.92■□□□□ 0.14
Alms1Q8K4E0 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.92■□□□□ 0.14
Alms1Q8K4E0 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Alms1Q8K4E0 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Alms1Q8K4E0 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Alms1Q8K4E0 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Alms1Q8K4E0 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Alms1Q8K4E0 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.92■□□□□ 0.14
Alms1Q8K4E0 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Alms1Q8K4E0 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Alms1Q8K4E0 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Alms1Q8K4E0 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Alms1Q8K4E0 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Alms1Q8K4E0 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.91■□□□□ 0.14
Alms1Q8K4E0 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Alms1Q8K4E0 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Alms1Q8K4E0 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Alms1Q8K4E0 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.91■□□□□ 0.14
Alms1Q8K4E0 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Alms1Q8K4E0 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Alms1Q8K4E0 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.91■□□□□ 0.14
Alms1Q8K4E0 Gm12260-201ENSMUST00000122447 411 ntBASIC15.91■□□□□ 0.14
Alms1Q8K4E0 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC15.91■□□□□ 0.14
Alms1Q8K4E0 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.91■□□□□ 0.14
Alms1Q8K4E0 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Alms1Q8K4E0 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.91■□□□□ 0.14
Alms1Q8K4E0 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Alms1Q8K4E0 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Alms1Q8K4E0 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Alms1Q8K4E0 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC15.91■□□□□ 0.14
Alms1Q8K4E0 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Alms1Q8K4E0 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Alms1Q8K4E0 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Alms1Q8K4E0 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Alms1Q8K4E0 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Alms1Q8K4E0 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Alms1Q8K4E0 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
Alms1Q8K4E0 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.91■□□□□ 0.14
Alms1Q8K4E0 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Alms1Q8K4E0 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.91■□□□□ 0.14
Alms1Q8K4E0 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Alms1Q8K4E0 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Alms1Q8K4E0 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Alms1Q8K4E0 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms