Protein–RNA interactions for Protein: Q8K243

Trim68, E3 ubiquitin-protein ligase TRIM68, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim68Q8K243 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC17.69■□□□□ 0.42
Trim68Q8K243 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trim68Q8K243 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim68Q8K243 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim68Q8K243 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim68Q8K243 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim68Q8K243 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim68Q8K243 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim68Q8K243 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim68Q8K243 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Trim68Q8K243 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim68Q8K243 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim68Q8K243 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim68Q8K243 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trim68Q8K243 Gm11594-201ENSMUST00000122313 162 ntBASIC17.68■□□□□ 0.42
Trim68Q8K243 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.68■□□□□ 0.42
Trim68Q8K243 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim68Q8K243 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.68■□□□□ 0.42
Trim68Q8K243 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trim68Q8K243 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.68■□□□□ 0.42
Trim68Q8K243 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.68■□□□□ 0.42
Trim68Q8K243 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim68Q8K243 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.68■□□□□ 0.42
Trim68Q8K243 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.68■□□□□ 0.42
Trim68Q8K243 Rps4l-201ENSMUST00000071745 943 ntBASIC17.68■□□□□ 0.42
Trim68Q8K243 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim68Q8K243 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim68Q8K243 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim68Q8K243 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim68Q8K243 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim68Q8K243 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim68Q8K243 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trim68Q8K243 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim68Q8K243 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim68Q8K243 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.67■□□□□ 0.42
Trim68Q8K243 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim68Q8K243 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim68Q8K243 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim68Q8K243 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Trim68Q8K243 Gm15372-201ENSMUST00000120729 834 ntBASIC17.67■□□□□ 0.42
Trim68Q8K243 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim68Q8K243 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC17.67■□□□□ 0.42
Trim68Q8K243 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim68Q8K243 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.67■□□□□ 0.42
Trim68Q8K243 Vti1a-206ENSMUST00000225529 1244 ntBASIC17.67■□□□□ 0.42
Trim68Q8K243 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim68Q8K243 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trim68Q8K243 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trim68Q8K243 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim68Q8K243 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim68Q8K243 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim68Q8K243 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim68Q8K243 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.67■□□□□ 0.42
Trim68Q8K243 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.67■□□□□ 0.42
Trim68Q8K243 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim68Q8K243 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim68Q8K243 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim68Q8K243 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.66■□□□□ 0.42
Trim68Q8K243 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim68Q8K243 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim68Q8K243 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim68Q8K243 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim68Q8K243 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trim68Q8K243 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim68Q8K243 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.66■□□□□ 0.42
Trim68Q8K243 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim68Q8K243 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim68Q8K243 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim68Q8K243 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim68Q8K243 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim68Q8K243 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Trim68Q8K243 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim68Q8K243 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim68Q8K243 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim68Q8K243 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim68Q8K243 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim68Q8K243 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trim68Q8K243 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim68Q8K243 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim68Q8K243 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC17.65■□□□□ 0.42
Trim68Q8K243 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim68Q8K243 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim68Q8K243 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim68Q8K243 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim68Q8K243 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim68Q8K243 Gm1401-201ENSMUST00000122048 772 ntBASIC17.65■□□□□ 0.42
Trim68Q8K243 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.65■□□□□ 0.42
Trim68Q8K243 Mir5131-201ENSMUST00000175426 93 ntBASIC17.65■□□□□ 0.42
Trim68Q8K243 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim68Q8K243 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.65■□□□□ 0.42
Trim68Q8K243 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim68Q8K243 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trim68Q8K243 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.65■□□□□ 0.42
Trim68Q8K243 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim68Q8K243 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim68Q8K243 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim68Q8K243 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim68Q8K243 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim68Q8K243 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.65■□□□□ 0.42
Trim68Q8K243 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms