Protein–RNA interactions for Protein: Q8K1J5

Sde2, Replication stress response regulator SDE2, mousemouse

Known RBP Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sde2Q8K1J5 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sde2Q8K1J5 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC19.71■□□□□ 0.75
Sde2Q8K1J5 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC19.71■□□□□ 0.75
Sde2Q8K1J5 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Sde2Q8K1J5 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Sde2Q8K1J5 Gm42670-201ENSMUST00000201816 1292 ntBASIC19.71■□□□□ 0.75
Sde2Q8K1J5 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC19.71■□□□□ 0.75
Sde2Q8K1J5 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC19.71■□□□□ 0.75
Sde2Q8K1J5 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sde2Q8K1J5 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sde2Q8K1J5 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Sde2Q8K1J5 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sde2Q8K1J5 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sde2Q8K1J5 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Sde2Q8K1J5 AC132265.1-201ENSMUST00000219233 1665 ntBASIC19.7■□□□□ 0.74
Sde2Q8K1J5 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sde2Q8K1J5 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Sde2Q8K1J5 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Sde2Q8K1J5 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sde2Q8K1J5 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sde2Q8K1J5 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sde2Q8K1J5 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sde2Q8K1J5 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sde2Q8K1J5 Gm6858-201ENSMUST00000208582 1468 ntBASIC19.69■□□□□ 0.74
Sde2Q8K1J5 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Sde2Q8K1J5 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sde2Q8K1J5 Gm13036-201ENSMUST00000117799 748 ntBASIC19.69■□□□□ 0.74
Sde2Q8K1J5 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Sde2Q8K1J5 Gm12260-201ENSMUST00000122447 411 ntBASIC19.69■□□□□ 0.74
Sde2Q8K1J5 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC19.69■□□□□ 0.74
Sde2Q8K1J5 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC19.69■□□□□ 0.74
Sde2Q8K1J5 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Sde2Q8K1J5 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Sde2Q8K1J5 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Sde2Q8K1J5 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Sde2Q8K1J5 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Sde2Q8K1J5 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Sde2Q8K1J5 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Sde2Q8K1J5 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sde2Q8K1J5 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sde2Q8K1J5 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sde2Q8K1J5 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sde2Q8K1J5 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sde2Q8K1J5 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sde2Q8K1J5 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sde2Q8K1J5 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sde2Q8K1J5 Gm27628-201ENSMUST00000184911 107 ntBASIC19.68■□□□□ 0.74
Sde2Q8K1J5 Gm43935-201ENSMUST00000203569 1050 ntBASIC19.68■□□□□ 0.74
Sde2Q8K1J5 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Sde2Q8K1J5 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sde2Q8K1J5 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sde2Q8K1J5 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Sde2Q8K1J5 Gm3928-201ENSMUST00000121141 1307 ntBASIC19.68■□□□□ 0.74
Sde2Q8K1J5 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Sde2Q8K1J5 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Sde2Q8K1J5 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sde2Q8K1J5 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Sde2Q8K1J5 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sde2Q8K1J5 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sde2Q8K1J5 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sde2Q8K1J5 Gm7222-201ENSMUST00000117512 906 ntBASIC19.67■□□□□ 0.74
Sde2Q8K1J5 Gm6184-201ENSMUST00000120403 1261 ntBASIC19.67■□□□□ 0.74
Sde2Q8K1J5 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC19.67■□□□□ 0.74
Sde2Q8K1J5 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC19.67■□□□□ 0.74
Sde2Q8K1J5 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC19.67■□□□□ 0.74
Sde2Q8K1J5 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sde2Q8K1J5 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC19.67■□□□□ 0.74
Sde2Q8K1J5 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sde2Q8K1J5 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Sde2Q8K1J5 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Sde2Q8K1J5 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Sde2Q8K1J5 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Sde2Q8K1J5 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.67■□□□□ 0.74
Sde2Q8K1J5 Ddx41-204ENSMUST00000224765 2199 ntBASIC19.67■□□□□ 0.74
Sde2Q8K1J5 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sde2Q8K1J5 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sde2Q8K1J5 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sde2Q8K1J5 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Sde2Q8K1J5 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.66■□□□□ 0.74
Sde2Q8K1J5 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Sde2Q8K1J5 Gm14140-201ENSMUST00000119999 995 ntBASIC19.66■□□□□ 0.74
Sde2Q8K1J5 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sde2Q8K1J5 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sde2Q8K1J5 Mir6404-201ENSMUST00000183699 94 ntBASIC19.66■□□□□ 0.74
Sde2Q8K1J5 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sde2Q8K1J5 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sde2Q8K1J5 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Sde2Q8K1J5 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sde2Q8K1J5 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sde2Q8K1J5 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Sde2Q8K1J5 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sde2Q8K1J5 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sde2Q8K1J5 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sde2Q8K1J5 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sde2Q8K1J5 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Sde2Q8K1J5 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sde2Q8K1J5 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Sde2Q8K1J5 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Sde2Q8K1J5 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Sde2Q8K1J5 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms