Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rtn1Q8K0T0 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rtn1Q8K0T0 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.85■□□□□ 0.61
Rtn1Q8K0T0 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rtn1Q8K0T0 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Rtn1Q8K0T0 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18.85■□□□□ 0.61
Rtn1Q8K0T0 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rtn1Q8K0T0 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rtn1Q8K0T0 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rtn1Q8K0T0 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Rtn1Q8K0T0 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Rtn1Q8K0T0 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rtn1Q8K0T0 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rtn1Q8K0T0 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.85■□□□□ 0.61
Rtn1Q8K0T0 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Rtn1Q8K0T0 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
Rtn1Q8K0T0 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rtn1Q8K0T0 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rtn1Q8K0T0 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rtn1Q8K0T0 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Rtn1Q8K0T0 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rtn1Q8K0T0 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rtn1Q8K0T0 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rtn1Q8K0T0 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC18.84■□□□□ 0.61
Rtn1Q8K0T0 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.84■□□□□ 0.61
Rtn1Q8K0T0 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.84■□□□□ 0.61
Rtn1Q8K0T0 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rtn1Q8K0T0 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Rtn1Q8K0T0 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC18.84■□□□□ 0.61
Rtn1Q8K0T0 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rtn1Q8K0T0 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.84■□□□□ 0.61
Rtn1Q8K0T0 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rtn1Q8K0T0 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rtn1Q8K0T0 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rtn1Q8K0T0 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rtn1Q8K0T0 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rtn1Q8K0T0 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Rtn1Q8K0T0 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rtn1Q8K0T0 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rtn1Q8K0T0 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rtn1Q8K0T0 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rtn1Q8K0T0 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Rtn1Q8K0T0 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Rtn1Q8K0T0 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rtn1Q8K0T0 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rtn1Q8K0T0 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rtn1Q8K0T0 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rtn1Q8K0T0 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Rtn1Q8K0T0 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.61
Rtn1Q8K0T0 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.83■□□□□ 0.61
Rtn1Q8K0T0 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Rtn1Q8K0T0 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rtn1Q8K0T0 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
Rtn1Q8K0T0 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rtn1Q8K0T0 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.83■□□□□ 0.6
Rtn1Q8K0T0 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.83■□□□□ 0.6
Rtn1Q8K0T0 Gm44430-201ENSMUST00000203376 995 ntBASIC18.83■□□□□ 0.6
Rtn1Q8K0T0 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rtn1Q8K0T0 Gm45328-201ENSMUST00000210942 917 ntBASIC18.83■□□□□ 0.6
Rtn1Q8K0T0 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rtn1Q8K0T0 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rtn1Q8K0T0 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC18.83■□□□□ 0.6
Rtn1Q8K0T0 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rtn1Q8K0T0 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rtn1Q8K0T0 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rtn1Q8K0T0 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rtn1Q8K0T0 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Rtn1Q8K0T0 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Rtn1Q8K0T0 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rtn1Q8K0T0 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rtn1Q8K0T0 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Rtn1Q8K0T0 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtn1Q8K0T0 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtn1Q8K0T0 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtn1Q8K0T0 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.82■□□□□ 0.6
Rtn1Q8K0T0 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtn1Q8K0T0 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Rtn1Q8K0T0 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rtn1Q8K0T0 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtn1Q8K0T0 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rtn1Q8K0T0 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtn1Q8K0T0 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rtn1Q8K0T0 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtn1Q8K0T0 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC18.82■□□□□ 0.6
Rtn1Q8K0T0 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtn1Q8K0T0 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rtn1Q8K0T0 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rtn1Q8K0T0 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtn1Q8K0T0 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Rtn1Q8K0T0 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtn1Q8K0T0 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Rtn1Q8K0T0 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtn1Q8K0T0 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rtn1Q8K0T0 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Rtn1Q8K0T0 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.81■□□□□ 0.6
Rtn1Q8K0T0 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Rtn1Q8K0T0 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Rtn1Q8K0T0 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtn1Q8K0T0 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rtn1Q8K0T0 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms