Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Hmgcs1Q8JZK9 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hmgcs1Q8JZK9 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Hmgcs1Q8JZK9 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hmgcs1Q8JZK9 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hmgcs1Q8JZK9 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hmgcs1Q8JZK9 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Hmgcs1Q8JZK9 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Hmgcs1Q8JZK9 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Hmgcs1Q8JZK9 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hmgcs1Q8JZK9 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hmgcs1Q8JZK9 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hmgcs1Q8JZK9 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hmgcs1Q8JZK9 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hmgcs1Q8JZK9 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Hmgcs1Q8JZK9 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
Hmgcs1Q8JZK9 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hmgcs1Q8JZK9 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hmgcs1Q8JZK9 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.61■□□□□ 0.09
Hmgcs1Q8JZK9 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Hmgcs1Q8JZK9 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hmgcs1Q8JZK9 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hmgcs1Q8JZK9 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hmgcs1Q8JZK9 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Hmgcs1Q8JZK9 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hmgcs1Q8JZK9 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hmgcs1Q8JZK9 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hmgcs1Q8JZK9 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.6■□□□□ 0.09
Hmgcs1Q8JZK9 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Hmgcs1Q8JZK9 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hmgcs1Q8JZK9 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Hmgcs1Q8JZK9 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hmgcs1Q8JZK9 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hmgcs1Q8JZK9 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hmgcs1Q8JZK9 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Hmgcs1Q8JZK9 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hmgcs1Q8JZK9 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hmgcs1Q8JZK9 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hmgcs1Q8JZK9 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC15.6■□□□□ 0.09
Hmgcs1Q8JZK9 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.6■□□□□ 0.09
Hmgcs1Q8JZK9 Gm13436-201ENSMUST00000120418 567 ntBASIC15.6■□□□□ 0.09
Hmgcs1Q8JZK9 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hmgcs1Q8JZK9 Gm3272-201ENSMUST00000181181 1229 ntBASIC15.6■□□□□ 0.09
Hmgcs1Q8JZK9 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hmgcs1Q8JZK9 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Hmgcs1Q8JZK9 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hmgcs1Q8JZK9 Gm10566-201ENSMUST00000086739 996 ntBASIC15.6■□□□□ 0.09
Hmgcs1Q8JZK9 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hmgcs1Q8JZK9 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.6■□□□□ 0.09
Hmgcs1Q8JZK9 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hmgcs1Q8JZK9 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.6■□□□□ 0.09
Hmgcs1Q8JZK9 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
Hmgcs1Q8JZK9 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hmgcs1Q8JZK9 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC15.6■□□□□ 0.09
Hmgcs1Q8JZK9 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hmgcs1Q8JZK9 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Hmgcs1Q8JZK9 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Hmgcs1Q8JZK9 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC15.59■□□□□ 0.09
Hmgcs1Q8JZK9 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hmgcs1Q8JZK9 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Hmgcs1Q8JZK9 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hmgcs1Q8JZK9 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hmgcs1Q8JZK9 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.59■□□□□ 0.09
Hmgcs1Q8JZK9 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hmgcs1Q8JZK9 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Hmgcs1Q8JZK9 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.59■□□□□ 0.09
Hmgcs1Q8JZK9 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
Hmgcs1Q8JZK9 Gm2274-201ENSMUST00000184539 609 ntBASIC15.59■□□□□ 0.09
Hmgcs1Q8JZK9 Gm18115-201ENSMUST00000221209 621 ntBASIC15.59■□□□□ 0.09
Hmgcs1Q8JZK9 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hmgcs1Q8JZK9 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hmgcs1Q8JZK9 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Hmgcs1Q8JZK9 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Hmgcs1Q8JZK9 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hmgcs1Q8JZK9 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hmgcs1Q8JZK9 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hmgcs1Q8JZK9 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hmgcs1Q8JZK9 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hmgcs1Q8JZK9 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hmgcs1Q8JZK9 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
Hmgcs1Q8JZK9 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hmgcs1Q8JZK9 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Hmgcs1Q8JZK9 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Hmgcs1Q8JZK9 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Hmgcs1Q8JZK9 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
Hmgcs1Q8JZK9 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Hmgcs1Q8JZK9 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Hmgcs1Q8JZK9 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Hmgcs1Q8JZK9 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Hmgcs1Q8JZK9 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
Hmgcs1Q8JZK9 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hmgcs1Q8JZK9 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.58■□□□□ 0.08
Hmgcs1Q8JZK9 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.58■□□□□ 0.08
Hmgcs1Q8JZK9 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hmgcs1Q8JZK9 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Hmgcs1Q8JZK9 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Hmgcs1Q8JZK9 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
Hmgcs1Q8JZK9 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Hmgcs1Q8JZK9 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.58■□□□□ 0.08
Hmgcs1Q8JZK9 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms